RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MCF2LO15068 1137 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 SLC16A3O15427 465 aaKnown RBP14.33□□□□□ -0.12
CCDC58-207ENST00000498466 ARHGAP6O43182 974 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 SLC28A2O43868 658 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 GIMD1P0DJR0 217 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 RBMS1P29558 406 aaKnown RBP14.33□□□□□ -0.12
CCDC58-207ENST00000498466 AKT2P31751 481 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 DUSP3P51452 185 aaPredicted RBP14.33□□□□□ -0.12
CCDC58-207ENST00000498466 OXCT1P55809 520 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 TAS2R38P59533 333 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 DLG2Q15700 870 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 C3orf38Q5JPI3 329 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 TTC39BQ5VTQ0 682 aaPredicted RBP14.33□□□□□ -0.12
CCDC58-207ENST00000498466 SYPL2Q5VXT5 272 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 Q6ZVU0 165 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 ATP6V0D2Q8N8Y2 350 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 OR13H1Q8NG92 308 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 IFI44Q8TCB0 444 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 ERCC4Q92889 916 aaPredicted RBP14.33□□□□□ -0.12
CCDC58-207ENST00000498466 MED8Q96G25 268 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 TRIM62Q9BVG3 475 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 CAAP1Q9H8G2 361 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 SLC12A6Q9UHW9 1150 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 SATB2Q9UPW6 733 aa14.33□□□□□ -0.12
CCDC58-207ENST00000498466 NYNRINQ9P2P1 1898 aaKnown RBP14.32□□□□□ -0.12
CCDC58-207ENST00000498466 ARID1BQ8NFD5 2236 aaPredicted RBP14.32□□□□□ -0.12
CCDC58-207ENST00000498466 TCAF2A6NFQ2 919 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 KCNU1A8MYU2 1149 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 ALOX15BO15296 676 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 ATP9BO43861 1147 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 HSP90AA1P07900 732 aaKnown RBP14.32□□□□□ -0.12
CCDC58-207ENST00000498466 HNRNPA2B1P22626 353 aaKnown RBP14.32□□□□□ -0.12
CCDC58-207ENST00000498466 PLK1P53350 603 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 PKP1Q13835 747 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 ZNF542PQ5EBM4 170 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 RABGAP1LQ5R372 815 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 KIAA1614Q5VZ46 1190 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 CXorf57Q6NSI4 855 aaKnown RBP14.32□□□□□ -0.12
CCDC58-207ENST00000498466 PPM1KQ8N3J5 372 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 SNRNP27Q8WVK2 155 aaKnown RBP14.32□□□□□ -0.12
CCDC58-207ENST00000498466 RNF34Q969K3 372 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 SPATA32Q96LK8 384 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 NT5C1BQ96P26 610 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 PPP1R9BQ96SB3 815 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 TSG101Q99816 390 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 DUSP23Q9BVJ7 150 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 USP29Q9HBJ7 922 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 DNAJC28Q9NX36 388 aa14.32□□□□□ -0.12
CCDC58-207ENST00000498466 MYO18BQ8IUG5 2567 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 LY6G6EA0A0G2JKS1 128 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 K7ESM1 405 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 KPNA3O00505 521 aaPredicted RBP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 SCAMP1O15126 338 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 NEBLO76041 1014 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 WISP1O95388 367 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 TRUB2O95900 331 aaKnown RBP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 KRT10P13645 584 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 CLDN2P57739 230 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 CCDC15Q0P6D6 951 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 ISXQ2M1V0 245 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 ZNF284Q2VY69 593 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 PIP5KL1Q5T9C9 394 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 NEK5Q6P3R8 708 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 KRBA2Q6ZNG9 492 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 BEND5Q7L4P6 421 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 HORMAD1Q86X24 394 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 SLC22A18ASQ8N1D0 253 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 KAT5Q92993 513 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 SLC35C1Q96A29 364 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 CCDC97Q96F63 343 aaPredicted RBP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 RPRD1AQ96P16 312 aaPredicted RBP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 NOX5Q96PH1 765 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 PRMT1Q99873 361 aaKnown RBP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 POPDC2Q9HBU9 364 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 DYRK4Q9NR20 520 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 ARMCX3Q9UH62 379 aaPredicted RBP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 VPS28Q9UK41 221 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
CCDC58-207ENST00000498466 U3KQA8 63 aa14.31□□□□□ -0.12
CCDC58-207ENST00000498466 SYNJ2BP-COX16A0A087WUM0 186 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 K7ENP7 123 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 PCDH8O95206 1070 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 TGM2P21980 687 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 GPD2P43304 727 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 ACADSBP45954 432 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 HNRNPKP61978 463 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC58-207ENST00000498466 FKBP3Q00688 224 aaKnown RBP14.3□□□□□ -0.12
CCDC58-207ENST00000498466 CENPCQ03188 943 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 CDKN3Q16667 212 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 INO80CQ6PI98 192 aaPredicted RBP14.3□□□□□ -0.12
CCDC58-207ENST00000498466 FOXR1Q6PIV2 292 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 IGF2-ASQ6U949 168 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 CCDC81Q6ZN84 652 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 GCNT7Q6ZNI0 430 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 Q6ZSR6 202 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 PRICKLE2Q7Z3G6 844 aa14.3□□□□□ -0.12
CCDC58-207ENST00000498466 PTAR1Q7Z6K3 402 aaPredicted RBP14.3□□□□□ -0.12
CCDC58-207ENST00000498466 SH2D3CQ8N5H7 860 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms