RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PKMP14618 531 aaKnown RBP3.16□□□□□ -1.9
RIF1-212ENST00000498041 CHN1P15882 459 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 CHRNA5P30532 468 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 ADD2P35612 726 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 RBM5P52756 815 aaKnown RBP eCLIP3.16□□□□□ -1.9
RIF1-212ENST00000498041 PMPCAQ10713 525 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 PDCLQ13371 301 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 CUL4BQ13620 913 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 ARL13AQ5H913 290 aaPredicted RBP3.16□□□□□ -1.9
RIF1-212ENST00000498041 ANO1Q5XXA6 986 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 TTLL5Q6EMB2 1281 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 MTFR2Q6P444 385 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 SLC30A9Q6PML9 568 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 SYNE3Q6ZMZ3 975 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 COLCA1Q6ZS62 124 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 B4GALNT4Q76KP1 1039 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 RASGRP2Q7LDG7 609 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 NKAPQ8N5F7 415 aaKnown RBP3.16□□□□□ -1.9
RIF1-212ENST00000498041 Q8N9P0 234 aaPredicted RBP3.16□□□□□ -1.9
RIF1-212ENST00000498041 FAM110DQ8TAY7 271 aaPredicted RBP3.16□□□□□ -1.9
RIF1-212ENST00000498041 IP6K1Q92551 441 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 KCNJ9Q92806 393 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 MSI2Q96DH6 328 aaKnown RBP3.16□□□□□ -1.9
RIF1-212ENST00000498041 NLRP4Q96MN2 994 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 HDHD5Q9BXW7 423 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 TRIM31Q9BZY9 425 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 TWSG1Q9GZX9 223 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 IL21RQ9HBE5 538 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 SPAG4Q9NPE6 437 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 FZD3Q9NPG1 666 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 SLC22A11Q9NSA0 550 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 ARL15Q9NXU5 204 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 FBXO4Q9UKT5 387 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 SIGLEC1Q9BZZ2 1709 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 ABCC10Q5T3U5 1492 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.15□□□□□ -1.9
RIF1-212ENST00000498041 A0A1W2PPC1 479 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 MYMKA6NI61 221 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 NPIPB13A6NJU9 1138 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 NPIPB5A8MRT5 1133 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 NPIPB4C9JG80 1138 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 IRAK2O43187 625 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 CCNT1O60563 726 aaKnown RBP3.15□□□□□ -1.91
RIF1-212ENST00000498041 ATG13O75143 517 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 EPN2O95208 641 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 SYF2O95926 243 aaKnown RBP3.15□□□□□ -1.91
RIF1-212ENST00000498041 DHRS4L1P0CG22 281 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 CHRNB1P11230 501 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 GSTM2P28161 218 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 CCT4P50991 539 aaKnown RBP3.15□□□□□ -1.91
RIF1-212ENST00000498041 ARL4CP56559 192 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 RHAGQ02094 409 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 GAD2Q05329 585 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 ZBTB16Q05516 673 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 SEMA3AQ14563 771 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 ADCK5Q3MIX3 580 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 ZNF260Q3ZCT1 412 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 LEXMQ3ZCV2 418 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 PLK5Q496M5 336 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 LRRC24Q50LG9 513 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 ALG10Q5BKT4 473 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 ALG10BQ5I7T1 473 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 VWA5B1Q5TIE3 1220 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 AWAT2Q6E213 333 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 TRAPPC11Q7Z392 1133 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 IGFN1Q86VF2 1251 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 MOGAT3Q86VF5 341 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 VPS52Q8N1B4 723 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 SPPL3Q8TCT6 385 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 TMEM174Q8WUU8 243 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 AFG1LQ8WV93 481 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 SLC25A28Q96A46 364 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 TBC1D20Q96BZ9 403 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 KTI12Q96EK9 354 aaPredicted RBP3.15□□□□□ -1.91
RIF1-212ENST00000498041 HERPUD2Q9BSE4 406 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 ARHGAP39Q9C0H5 1083 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 CLPBQ9H078 707 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 TASP1Q9H6P5 420 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 CHODLQ9H9P2 273 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 PLEKHA2Q9HB19 425 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 ZBTB40Q9NUA8 1239 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 TMEM248Q9NWD8 314 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 KLQ9UEF7 1012 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 ANAPC4Q9UJX5 808 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 MORC2Q9Y6X9 1032 aaPredicted RBP3.15□□□□□ -1.91
RIF1-212ENST00000498041 FGD6Q6ZV73 1430 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 TRAPPC8Q9Y2L5 1435 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 SAMD9LQ8IVG5 1584 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 FYCO1Q9BQS8 1478 aa3.15□□□□□ -1.91
RIF1-212ENST00000498041 EFCAB5A4FU69 1503 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 NAIPQ13075 1403 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 MYOM3Q5VTT5 1437 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 UACAQ9BZF9 1416 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 SETD5Q9C0A6 1442 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 TMEM272A0A1B0GTI8 110 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 TCRBV7S3A2A0A539 114 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 PLEKHD1A6NEE1 506 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 TMEM247A6NEH6 219 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 A6NNC1 897 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 H3BNX3 289 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms