RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PEX12O00623 359 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 SGPL1O95470 568 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 CBX6O95503 412 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 SYF2O95926 243 aaKnown RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 HLA-DQA2P01906 255 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 CRYABP02511 175 aaKnown RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 PKMP14618 531 aaKnown RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 CHN1P15882 459 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 HOXB9P17482 250 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 XBP1P17861 261 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 PRKCHP24723 683 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 CNTFP26441 200 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 KLRC2P26717 231 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 SKIV2L2P42285 1042 aaKnown RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 PMPCAQ10713 525 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 ERV3-1Q14264 604 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 ZNF484Q5JVG2 852 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 ASPHD1Q5U4P2 390 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 SLC30A9Q6PML9 568 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 COLCA1Q6ZS62 124 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 PIM3Q86V86 326 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 SUGP1Q8IWZ8 645 aaKnown RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 DPP10Q8N608 796 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 LINS1Q8NG48 757 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 ADAMTS15Q8TE58 950 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 ZFPM2Q8WW38 1151 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 CENPIQ92674 756 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 ZNF347Q96SE7 839 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 HDHD5Q9BXW7 423 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 CADM1Q9BY67 442 aaKnown RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 FAM234AQ9H0X4 552 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 PAPOLBQ9NRJ5 636 aaKnown RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 THAP1Q9NVV9 213 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 KLQ9UEF7 1012 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 ANAPC4Q9UJX5 808 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 UTS2RQ9UKP6 389 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 ZNF335Q9H4Z2 1342 aaPredicted RBP3.58□□□□□ -1.84
PSPC1-205ENST00000497722 IGLV5-39A0A0G2JS06 123 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 TCRBV7S3A2A0A539 114 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 TMEM247A6NEH6 219 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 RRN3P2A6NIE6 340 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 SAC3D1A6NKF1 404 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 B9A039 149 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 H3BNX3 289 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 PRPF4O43172 522 aaKnown RBP eCLIP3.57□□□□□ -1.84
PSPC1-205ENST00000497722 HBP1O60381 514 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 TSPAN3O60637 253 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 FAM155BO75949 473 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 IFIT1P09914 478 aaKnown RBP3.57□□□□□ -1.84
PSPC1-205ENST00000497722 SCP2P22307 547 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 PRPH2P23942 346 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 KCNJ4P48050 445 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 ADPRHP54922 357 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 UBE3AQ05086 875 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 DLGAP5Q15398 846 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 FAM171A1Q5VUB5 890 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 HMBOX1Q6NT76 420 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 RNF144BQ7Z419 303 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 GHDCQ8N2G8 530 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 ARL14EPQ8N8R7 260 aaPredicted RBP3.57□□□□□ -1.84
PSPC1-205ENST00000497722 OR52N4Q8NGI2 321 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 NCSTNQ92542 709 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 IP6K1Q92551 441 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 KTI12Q96EK9 354 aaPredicted RBP3.57□□□□□ -1.84
PSPC1-205ENST00000497722 UBXN10Q96LJ8 280 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 PPP1R10Q96QC0 940 aaKnown RBP3.57□□□□□ -1.84
PSPC1-205ENST00000497722 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.57□□□□□ -1.84
PSPC1-205ENST00000497722 MSRB1Q9NZV6 116 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 GTF2A1LQ9UNN4 478 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 LZTS1Q9Y250 596 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 GDAQ9Y2T3 454 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 GPR52Q9Y2T5 361 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 SQORQ9Y6N5 450 aa3.57□□□□□ -1.84
PSPC1-205ENST00000497722 FAM90A20PA6NIJ5 464 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 GTPBP1O00178 669 aaKnown RBP3.56□□□□□ -1.84
PSPC1-205ENST00000497722 KLK10O43240 276 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 CSF1P09603 554 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 LYL1P12980 280 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 ACP5P13686 325 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 IGFBP2P18065 325 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 PGM1P36871 562 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 ARHGAP8P85298 464 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 TRPC3Q13507 836 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 THOC5Q13769 683 aaKnown RBP3.56□□□□□ -1.84
PSPC1-205ENST00000497722 DCTN1Q14203 1278 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 C5orf22Q49AR2 442 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 TTC39AQ5SRH9 613 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 UBAP2Q5T6F2 1119 aaKnown RBP3.56□□□□□ -1.84
PSPC1-205ENST00000497722 TMEM268Q5VZI3 342 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 ISM2Q6H9L7 571 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 MTFR2Q6P444 385 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 ZNF474Q6S9Z5 364 aaPredicted RBP3.56□□□□□ -1.84
PSPC1-205ENST00000497722 RASGRP2Q7LDG7 609 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 FAM185AQ8N0U4 392 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 PAQR4Q8N4S7 273 aaPredicted RBP3.56□□□□□ -1.84
PSPC1-205ENST00000497722 USP38Q8NB14 1042 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 SLC44A5Q8NCS7 719 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 B4GALNT2Q8NHY0 566 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 USP13Q92995 863 aaPredicted RBP3.56□□□□□ -1.84
PSPC1-205ENST00000497722 CD180Q99467 661 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms