RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 FAM102AQ5T9C2 384 aaPredicted RBP13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 APOBEC3HQ6NTF7 200 aaKnown RBP13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 SIAH1Q8IUQ4 282 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 CLIP4Q8N3C7 705 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 CANT1Q8WVQ1 401 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 GATA5Q9BWX5 397 aaPredicted RBP13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 RSAD1Q9HA92 442 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 SEPT10Q9P0V9 454 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 CDYLQ9Y232 598 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 MAPTP10636 758 aaKnown RBP13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 PRKCQQ04759 706 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 PHKG1Q16816 387 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 VASH1Q7L8A9 365 aaPredicted RBP13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 DSG4Q86SJ6 1040 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 EXOC8Q8IYI6 725 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 PARP8Q8N3A8 854 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 SPATA17Q96L03 361 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 SIGLEC10Q96LC7 697 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 MKS1Q9NXB0 559 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 ITGB4P16144 1822 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 ACOT8O14734 319 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 MGAT1P26572 445 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 PTPN7P35236 360 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 OPRL1P41146 370 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 NAGLUP54802 743 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 PBXIP1Q96AQ6 731 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 SGF29Q96ES7 293 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 UPF3AQ9H1J1 476 aaKnown RBP13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 FANCEQ9HB96 536 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 VTA1Q9NP79 307 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 SNX15Q9NRS6 342 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 NYAP2Q9P242 653 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 PCDHA11Q9Y5I1 949 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 ZNF541Q9H0D2 1346 aa13.3□□□□□ -0.28
GAPVD1-220ENST00000497580 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 CST3P01034 146 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 POLR2BP30876 1174 aaKnown RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 ARL1P40616 181 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 NR4A2P43354 598 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 RAP1GAPP47736 663 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 OCA2Q04671 838 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TRIM25Q14258 630 aaKnown RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TBCELQ5QJ74 424 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 HMBOX1Q6NT76 420 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 ZBTB33Q86T24 672 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TMEM126BQ8IUX1 230 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 WDTC1Q8N5D0 677 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 DGCR6LQ9BY27 220 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 ANKRD60Q9BZ19 345 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 ADNPQ9H2P0 1102 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 CISHQ9NSE2 258 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 DUS2Q9NX74 493 aaKnown RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 GTSE1Q9NYZ3 720 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 EGFL7Q9UHF1 273 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 HEATR9A2RTY3 570 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 SOBPA7XYQ1 873 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 PRPSAP2O60256 369 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 MAGP20916 626 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 MATN1P21941 496 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 HARS2P49590 506 aaKnown RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 MLLT10P55197 1068 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 NME5P56597 212 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 RAB15P59190 212 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 MYL6P60660 151 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TFDP2Q14188 446 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TNIP2Q8NFZ5 429 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 MSTO1Q9BUK6 570 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 SNX25Q9H3E2 840 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 SMARCAD1Q9H4L7 1026 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 EPS8L2Q9H6S3 715 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 SPO11Q9Y5K1 396 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 FAM47E-STBD1D6RA91 191 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TK2O00142 265 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 EIF3FO00303 357 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 HDAC3O15379 428 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TRIM13O60858 407 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 KRT19P08727 400 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 IL1R1P14778 569 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 GLDCP23378 1020 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TBXAS1P24557 533 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 MZF1P28698 734 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 STILQ15468 1287 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 ZIK1Q3SY52 487 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 RSBN1LQ6PCB5 846 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TTC30AQ86WT1 665 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 DCLK2Q8N568 766 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 PCYOX1LQ8NBM8 494 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 PEBP4Q96S96 227 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 TSPAN18Q96SJ8 248 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 ADPGKQ9BRR6 497 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 C1orf50Q9BV19 199 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 SDCBP2Q9H190 292 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 CPQQ9Y646 472 aa13.29□□□□□ -0.28
GAPVD1-220ENST00000497580 A0A1W2PQ67 120 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 KPNA7A9QM74 516 aa13.28□□□□□ -0.28
GAPVD1-220ENST00000497580 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms