RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	ZNF658	Q5TYW1	1059 aa	Predicted RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	OTUD1	Q5VV17	481 aa	Predicted RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	PRAMEF13	Q5VWM6	474 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	KRT39	Q6A163	491 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	PM20D1	Q6GTS8	502 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	NADSYN1	Q6IA69	706 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	GRAMD4	Q6IC98	578 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	DPY19L2P1	Q6NXN4	242 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	TPGS1	Q6ZTW0	290 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	HID1	Q8IV36	788 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	FBXL13	Q8NEE6	735 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	IPO4	Q8TEX9	1081 aa	Known RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	SORCS1	Q8WY21	1168 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	SECISBP2L	Q93073	1101 aa	Known RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	MRGPRX1	Q96LB2	322 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	DPH2	Q9BQC3	489 aa	Predicted RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	ORAI3	Q9BRQ5	295 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	MKRN2	Q9H000	416 aa	Known RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	TLR8	Q9NR97	1041 aa	Known RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	RAB20	Q9NX57	234 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	CLIC5	Q9NZA1	410 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	EHD2	Q9NZN4	543 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	USP36	Q9P275	1121 aa	Known RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	TBC1D14	Q9P2M4	693 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	TJP2	Q9UDY2	1190 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	CYTH4	Q9UIA0	394 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	STOML2	Q9UJZ1	356 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	RALY	Q9UKM9	306 aa	Known RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	TSPAN16	Q9UKR8	245 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	AGO1	Q9UL18	857 aa	Known RBP	5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	SH3BP1	Q9Y3L3	701 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	LRP4	O75096	1905 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	MYLK	Q15746	1914 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	IGSF10	Q6WRI0	2623 aa		5.76	□□□□□ -1.49
UBE3C-208	ENST00000497368	BPTF	Q12830	3046 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ANKRD11	Q6UB99	2663 aa	Predicted RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	XPO1	O14980	1071 aa	Known RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	SLC16A3	O15427	465 aa	Known RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	IGLV3-19	P01714	112 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	PGR	P06401	933 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	HMBS	P08397	361 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	C1QTNF9	P0C862	333 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	CD8B	P10966	210 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ENG	P17813	658 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	SDHB	P21912	280 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	HLA-F	P30511	346 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	NTSR1	P30989	418 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	GBP1	P32455	592 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ATP5C1	P36542	298 aa	Known RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	RPL34	P49207	117 aa	Known RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	DHPS	P49366	369 aa	Predicted RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	DAOA	P59103	153 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	YWHAG	P61981	247 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	AMPD2	Q01433	879 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ADIG	Q0VDE8	80 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	EFEMP1	Q12805	493 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	SEMA3B	Q13214	749 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ADAM9	Q13443	819 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	EIF4EBP2	Q13542	120 aa	Predicted RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	CAMK2G	Q13555	558 aa	Predicted RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ELF2	Q15723	593 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ANO4	Q32M45	955 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	EOGT	Q5NDL2	527 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	C10orf120	Q5SQS8	335 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	TMCO4	Q5TGY1	634 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	MSANTD2	Q6P1R3	559 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	SLC23A3	Q6PIS1	610 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	CPXM2	Q8N436	756 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	DEFB119	Q8N690	84 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ANKRD52	Q8NB46	1076 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	DEFB124	Q8NES8	71 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	PIGK	Q92643	395 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	MISP3	Q96FF7	219 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	TMEM176A	Q96HP8	235 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	RHOV	Q96L33	236 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	BBS2	Q9BXC9	721 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	FBXO44	Q9H4M3	255 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ACP6	Q9NPH0	428 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	DEC1	Q9P2X7	70 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	THAP10	Q9P2Z0	257 aa	Predicted RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	XPO7	Q9UIA9	1087 aa	Known RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	RASAL2	Q9UJF2	1139 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	INTS6	Q9UL03	887 aa	Known RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	FRMD4B	Q9Y2L6	1034 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	SLC27A6	Q9Y2P4	619 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	CORIN	Q9Y5Q5	1042 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	STON1	Q9Y6Q2	735 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	LRRK1	Q38SD2	2015 aa		5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	SPEN	Q96T58	3664 aa	Known RBP	5.75	□□□□□ -1.49
UBE3C-208	ENST00000497368	ADAMTS20	P59510	1910 aa		5.74	□□□□□ -1.49
UBE3C-208	ENST00000497368	BECN2	A8MW95	431 aa		5.74	□□□□□ -1.49
UBE3C-208	ENST00000497368		I6L893	689 aa	Predicted RBP	5.74	□□□□□ -1.49
UBE3C-208	ENST00000497368	PMM2	O15305	246 aa		5.74	□□□□□ -1.49
UBE3C-208	ENST00000497368	RHOBTB1	O94844	696 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms