RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 SH2D3CQ8N5H7 860 aa17.61■□□□□ 0.41
SMC4-226ENST00000497311 FAM131CQ96AQ9 280 aa17.61■□□□□ 0.41
SMC4-226ENST00000497311 C18orf8Q96DM3 657 aa17.61■□□□□ 0.41
SMC4-226ENST00000497311 PGAP3Q96FM1 320 aaPredicted RBP17.61■□□□□ 0.41
SMC4-226ENST00000497311 CCDC86Q9H6F5 360 aaKnown RBP17.61■□□□□ 0.41
SMC4-226ENST00000497311 TMEM51Q9NW97 253 aa17.61■□□□□ 0.41
SMC4-226ENST00000497311 FTSJ1Q9UET6 329 aa17.61■□□□□ 0.41
SMC4-226ENST00000497311 SARDHQ9UL12 918 aa17.61■□□□□ 0.41
SMC4-226ENST00000497311 PPM1HQ9ULR3 514 aa17.61■□□□□ 0.41
SMC4-226ENST00000497311 GOLGA4Q13439 2230 aaKnown RBP17.61■□□□□ 0.41
SMC4-226ENST00000497311 PLK4O00444 970 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 ALOX15BO15296 676 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 LATO43561 262 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 PLRG1O43660 514 aaKnown RBP17.6■□□□□ 0.41
SMC4-226ENST00000497311 BNIP3LO60238 219 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 RTN2O75298 545 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 CNTN5O94779 1100 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 ITGAVP06756 1048 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 RHOCP08134 193 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 TFE3P19532 575 aaPredicted RBP17.6■□□□□ 0.41
SMC4-226ENST00000497311 SCNN1AP37088 669 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 CCDC157Q569K6 752 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 FAM102AQ5T9C2 384 aaPredicted RBP17.6■□□□□ 0.41
SMC4-226ENST00000497311 NAPEPLDQ6IQ20 393 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 LRRC31Q6UY01 552 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 Q6ZVU0 165 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 ERICH1Q86X53 443 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 GATAD2AQ86YP4 633 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 PIP4K2CQ8TBX8 421 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 NT5C3BQ969T7 300 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 FARP1Q9Y4F1 1045 aaPredicted RBP17.6■□□□□ 0.41
SMC4-226ENST00000497311 FHOD1Q9Y613 1164 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 FREM2Q5SZK8 3169 aa17.6■□□□□ 0.41
SMC4-226ENST00000497311 TLR4O00206 839 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 YKT6O15498 198 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 SRCP12931 536 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 NUDT1P36639 197 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 ARRB1P49407 418 aaPredicted RBP17.59■□□□□ 0.41
SMC4-226ENST00000497311 CNTN1Q12860 1018 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 SLC25A52Q3SY17 297 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 POM121L1PQ3SYA9 428 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 ALFQ53S48 1182 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 ACBD5Q5T8D3 534 aaPredicted RBP17.59■□□□□ 0.41
SMC4-226ENST00000497311 TAF3Q5VWG9 929 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 XYLT1Q86Y38 959 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 TBCBQ99426 244 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 C2orf49Q9BVC5 232 aaPredicted RBP17.59■□□□□ 0.41
SMC4-226ENST00000497311 NUP62CLQ9H1M0 184 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 ANLNQ9NQW6 1124 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 SAMSN1Q9NSI8 373 aaKnown RBP17.59■□□□□ 0.41
SMC4-226ENST00000497311 ARHGAP20Q9P2F6 1191 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 DMTF1Q9Y222 760 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 HS3ST2Q9Y278 367 aa17.59■□□□□ 0.41
SMC4-226ENST00000497311 ANKRD11Q6UB99 2663 aaPredicted RBP17.59■□□□□ 0.41
SMC4-226ENST00000497311 DRGXA6NNA5 263 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 I6L893 689 aaPredicted RBP17.58■□□□□ 0.4
SMC4-226ENST00000497311 MT-CO1P00395 513 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 UCHL3P15374 230 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 MAT2AP31153 395 aaKnown RBP17.58■□□□□ 0.4
SMC4-226ENST00000497311 NXPH1P58417 271 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 SHBQ15464 509 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 AGBL4Q5VU57 503 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 SETD3Q86TU7 594 aaPredicted RBP17.58■□□□□ 0.4
SMC4-226ENST00000497311 TRIM69Q86WT6 500 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 ZNF683Q8IZ20 524 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 OXR1Q8N573 874 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 MFSD2AQ8NA29 543 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 ATP11CQ8NB49 1132 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 MSANTD4Q8NCY6 345 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 SAP25Q8TEE9 199 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 C1orf74Q96LT6 269 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 CCDC114Q96M63 670 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 PSMB7Q99436 277 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 NAA15Q9BXJ9 866 aaKnown RBP17.58■□□□□ 0.4
SMC4-226ENST00000497311 SNX10Q9Y5X0 201 aa17.58■□□□□ 0.4
SMC4-226ENST00000497311 FAM170AA1A519 330 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 ENC1O14682 589 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 SNAP91O60641 907 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 MAGEC1O60732 1142 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 LDOC1O95751 146 aaPredicted RBP17.57■□□□□ 0.4
SMC4-226ENST00000497311 LSM8O95777 96 aaKnown RBP17.57■□□□□ 0.4
SMC4-226ENST00000497311 EPHA8P29322 1005 aaPredicted RBP17.57■□□□□ 0.4
SMC4-226ENST00000497311 STAT4Q14765 748 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 SMAD1Q15797 465 aaKnown RBP17.57■□□□□ 0.4
SMC4-226ENST00000497311 TCP11X2Q5H9J9 407 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 CT47A1Q5JQC4 288 aaPredicted RBP17.57■□□□□ 0.4
SMC4-226ENST00000497311 C6orf118Q5T5N4 469 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 NOP9Q86U38 636 aaKnown RBP17.57■□□□□ 0.4
SMC4-226ENST00000497311 IQCHQ86VS3 1027 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 MDM1Q8TC05 714 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 STK33Q9BYT3 514 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 ERVMER34-1Q9H9K5 563 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 MPP6Q9NZW5 540 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 VPS51Q9UID3 782 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 LHX6Q9UPM6 363 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 ZFYVE26Q68DK2 2539 aa17.57■□□□□ 0.4
SMC4-226ENST00000497311 DSPP15924 2871 aaKnown RBP17.57■□□□□ 0.4
SMC4-226ENST00000497311 ACACAQ13085 2346 aa17.56■□□□□ 0.4
SMC4-226ENST00000497311 KNTC1P50748 2209 aa17.56■□□□□ 0.4
SMC4-226ENST00000497311 A0A0D9SEW6 157 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms