RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ZNF397Q8NF99 534 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC3-207ENST00000497251 SHC3Q92529 594 aa17.31■□□□□ 0.36
TRAPPC3-207ENST00000497251 IFT43Q96FT9 208 aa17.31■□□□□ 0.36
TRAPPC3-207ENST00000497251 LRIG1Q96JA1 1093 aa17.31■□□□□ 0.36
TRAPPC3-207ENST00000497251 C2orf49Q9BVC5 232 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC3-207ENST00000497251 OR51B4Q9Y5P0 310 aa17.31■□□□□ 0.36
TRAPPC3-207ENST00000497251 RRP8O43159 456 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 CALCAP01258 141 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 ZNF18P17022 549 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 ACP1P24666 158 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 ABCG1P45844 678 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 BPIFB4P59827 614 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 ZNF211Q13398 564 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 BRMS1LQ5PSV4 323 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 LRRC69Q6ZNQ3 347 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 SLC26A9Q7LBE3 791 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 KANSL1Q7Z3B3 1105 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 ZSCAN30Q86W11 494 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 SH2D3CQ8N5H7 860 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 TMIEQ8NEW7 156 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 PIP4K2CQ8TBX8 421 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 BAP1Q92560 729 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 UBL7Q96S82 380 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 RWDD2AQ9UIY3 292 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 VPS28Q9UK41 221 aa17.3■□□□□ 0.36
TRAPPC3-207ENST00000497251 PLXNA2O75051 1894 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 CXorf51AA0A1B0GTR3 108 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 PLK4O00444 970 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 KRT9P35527 623 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 SCNN1AP37088 669 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 PPP2CBP62714 309 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 PPP2CAP67775 309 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 EXOC3L4Q17RC7 722 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 PRAMEF14Q5SWL7 426 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 AGBL4Q5VU57 503 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 SETD3Q86TU7 594 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 SPATS2Q86XZ4 545 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 DCP2Q8IU60 420 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 WDTC1Q8N5D0 677 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 KLHDC7BQ96G42 594 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 C1orf74Q96LT6 269 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 CPXM1Q96SM3 734 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 EVA1BQ9NVM1 165 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 KLHL11Q9NVR0 708 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 STAP1Q9ULZ2 295 aa17.29■□□□□ 0.36
TRAPPC3-207ENST00000497251 LOC400499M0QZD8 3231 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 SMG1Q96Q15 3661 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 HELZ2Q9BYK8 2649 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 WNT9AO14904 365 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 RTN2O75298 545 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 DAB1O75553 588 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 PRNPP04156 253 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 USP8P40818 1118 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 STX17P56962 302 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 SLC6A3Q01959 620 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 SLC20A2Q08357 652 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 CNTN1Q12860 1018 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 TARDBPQ13148 414 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 TAF5Q15542 800 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 HES3Q5TGS1 186 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 OLFML1Q6UWY5 402 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 LRRC31Q6UY01 552 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 TMEM145Q8NBT3 493 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 SNIP1Q8TAD8 396 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 PGAP3Q96FM1 320 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 WDCPQ9H6R7 721 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 SYNCQ9H7C4 482 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 USP29Q9HBJ7 922 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 DYRK4Q9NR20 520 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 SARDHQ9UL12 918 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 VANGL2Q9ULK5 521 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 HS3ST4Q9Y661 456 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 AK5Q9Y6K8 562 aa17.28■□□□□ 0.36
TRAPPC3-207ENST00000497251 BECN2A8MW95 431 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 GADD45BO75293 160 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 PAGE1O75459 146 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 VAV1P15498 845 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 AKT2P31751 481 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 EIF2S3P41091 472 aaKnown RBP17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 CXCR3P49682 368 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 UBE2HP62256 183 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 PITX1P78337 314 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 BNIP3Q12983 259 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 DNAJC3Q13217 504 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 PROX2Q3B8N5 592 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 OR6B2Q6IFH4 312 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 ZNF783Q6ZMS7 281 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 DCBLD1Q8N8Z6 715 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 NT5C3BQ969T7 300 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 PPP1R16AQ96I34 528 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 HDAC8Q9BY41 377 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 MUC3BQ9H195 1237 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 RETREG1Q9H6L5 497 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 ARHGEF38Q9NXL2 777 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 CLCA2Q9UQC9 943 aa17.27■□□□□ 0.36
TRAPPC3-207ENST00000497251 TP53BP1Q12888 1972 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC3-207ENST00000497251 NEMP2A6NFY4 417 aa17.26■□□□□ 0.35
TRAPPC3-207ENST00000497251 DRGXA6NNA5 263 aa17.26■□□□□ 0.35
TRAPPC3-207ENST00000497251 M0QYT0 321 aa17.26■□□□□ 0.35
TRAPPC3-207ENST00000497251 ALPPL2P10696 532 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms