RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 LYSMD4Q5XG99 296 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 ZNF776Q68DI1 518 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 RWDD4Q6NW29 188 aaKnown RBP16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 CYP2U1Q7Z449 544 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 VPS36Q86VN1 386 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 RMDN1Q96DB5 314 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 PPP1R9BQ96SB3 815 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 ACE2Q9BYF1 805 aaPredicted RBP16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 RETREG1Q9H6L5 497 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 VPS45Q9NRW7 570 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 ABHD10Q9NUJ1 306 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 SERGEFQ9UGK8 458 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 SLC25A13Q9UJS0 675 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 PILRBQ9UKJ0 227 aa16.52■□□□□ 0.24
DNMT3A-215ENST00000496570 NUMA1Q14980 2115 aa16.52■□□□□ 0.23
DNMT3A-215ENST00000496570 ATXN2Q99700 1313 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 ZNF821O75541 412 aaPredicted RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 ACADMP11310 421 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 IL1R2P27930 398 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 MIPP30301 263 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 ACSL1P33121 698 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 ACVRL1P37023 503 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 MAPKAPK2P49137 400 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 METAP1P53582 386 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 GALCP54803 685 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 ARF5P84085 180 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 DLG2Q15700 870 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 CCDC122Q5T0U0 273 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 LINGO4Q6UY18 593 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 FAM124AQ86V42 546 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 MMAAQ8IVH4 418 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 RTL3Q8N8U3 475 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 PIGKQ92643 395 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 ARHGEF2Q92974 986 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 HSPA12BQ96MM6 686 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 CHP1Q99653 195 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 SNRNP25Q9BV90 132 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 C2orf49Q9BVC5 232 aaPredicted RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 GPR174Q9BXC1 333 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 PACSIN1Q9BY11 444 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 PABPC3Q9H361 631 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 MRPL47Q9HD33 250 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 DNAI1Q9UI46 699 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 SARDHQ9UL12 918 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 ACTL7AQ9Y615 435 aa16.51■□□□□ 0.23
DNMT3A-215ENST00000496570 SSU72P8A0A1W2PR75 194 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 WASH4PA8MWX3 477 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 RNF103O00237 685 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 MID1O15344 667 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 OXTRP30559 389 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 NNMTP40261 264 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 KRT83P78385 493 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 LMNB2Q03252 620 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 ELAVL3Q14576 367 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 CST6Q15828 149 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 SLC18A3Q16572 532 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 Q6ZVU0 165 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 SYT12Q8IV01 421 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 AADATQ8N5Z0 425 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 FAM131CQ96AQ9 280 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 BTBD6Q96KE9 485 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 KCTD15Q96SI1 283 aaPredicted RBP16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 NUP85Q9BW27 656 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 ATP13A1Q9HD20 1204 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 DLL3Q9NYJ7 618 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 PCSK1NQ9UHG2 260 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 AP4E1Q9UPM8 1137 aa16.5■□□□□ 0.23
DNMT3A-215ENST00000496570 GON4LQ3T8J9 2241 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 CBX4O00257 560 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 CREB3O43889 395 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 NDUFS2O75306 463 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 DNTTP04053 509 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 CTSLP07711 333 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 EPHB2P29323 1055 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 DRD3P35462 400 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 PCK1P35558 622 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 RSPO4Q2I0M5 234 aaPredicted RBP16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 ERMARDQ5T6L9 678 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 TXNRD3NBQ6F5E7 133 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 USP30Q70CQ3 517 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 NIPA2Q8N8Q9 360 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 CADM4Q8NFZ8 388 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 OR2A12Q8NGT7 310 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 VOPP1Q96AW1 172 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 SPON2Q9BUD6 331 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 KLC2Q9H0B6 622 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 MAGEH1Q9H213 219 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 C6orf106Q9H6K1 298 aaPredicted RBP16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 PPM1HQ9ULR3 514 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 SCML1Q9UN30 329 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 SLCO1B1Q9Y6L6 691 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 PCDH15Q96QU1 1955 aa16.49■□□□□ 0.23
DNMT3A-215ENST00000496570 LNP1A1A4G5 178 aa16.48■□□□□ 0.23
DNMT3A-215ENST00000496570 METTL12A8MUP2 240 aa16.48■□□□□ 0.23
DNMT3A-215ENST00000496570 PRR5-ARHGAP8B1AHC4 643 aa16.48■□□□□ 0.23
DNMT3A-215ENST00000496570 MCF2LO15068 1137 aa16.48■□□□□ 0.23
DNMT3A-215ENST00000496570 RNF8O76064 485 aa16.48■□□□□ 0.23
DNMT3A-215ENST00000496570 MAOBP27338 520 aa16.48■□□□□ 0.23
DNMT3A-215ENST00000496570 SLC8A1P32418 973 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms