RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ATP13A2Q9NQ11 1180 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 TAS2R14Q9NYV8 317 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 DCDC2Q9UHG0 476 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 PCDHGC3Q9UN70 934 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 UGT2A1Q9Y4X1 527 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 IGSF9BQ9UPX0 1349 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 MYH4Q9Y623 1939 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ERVV-2B6SEH9 535 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 PI4K2BG5E9Z4 385 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 NPR1P16066 1061 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 OSBPP22059 807 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 CXCR2P25025 360 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 HSPA14Q0VDF9 509 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 CA9Q16790 459 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ARSKQ6UWY0 536 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 LUZP2Q86TE4 346 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 DDIASQ8IXT1 998 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 UBR7Q8N806 425 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 LEMD2Q8NC56 503 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ASB12Q8WXK4 309 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 NGLY1Q96IV0 654 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 MBOAT7Q96N66 472 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 GON7Q9BXV9 100 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 BARHL2Q9NY43 387 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 ABI2Q9NYB9 513 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 COQ3Q9NZJ6 369 aa8.32□□□□□ -1.08
CRNKL1-205ENST00000496549 USP6P35125 1406 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 IFT172Q9UG01 1749 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 SDR42E2A6NKP2 422 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PTGES3LE9PB15 166 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DYNC1LI2O43237 492 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TIPRLO75663 272 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 IMPDH1P20839 514 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 CAPGP40121 348 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 CASP3P42574 277 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC26A2P50443 739 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PPP5CP53041 499 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 BST2Q10589 180 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PEX6Q13608 980 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DLG2Q15700 870 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PLEKHG6Q3KR16 790 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 USP41Q3LFD5 358 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 ZNF773Q6PK81 442 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 LYSMD3Q7Z3D4 306 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 ERO1BQ86YB8 467 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 SLFN12Q8IYM2 578 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 SCML4Q8N228 414 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 FAR1Q8WVX9 515 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TP53INP1Q96A56 240 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 BDH2Q9BUT1 245 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 KCNK13Q9HB14 408 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 C1orf112Q9NSG2 853 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 SMPD3Q9NY59 655 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 IFT80Q9P2H3 777 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TUBGCP6Q96RT7 1819 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 A0A1B0GW55 424 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 SLCO1B7G3V0H7 640 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 H3BUI4 141 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PAHP00439 452 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 LDLRP01130 860 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DUX4L2P0CJ85 424 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DUX4L3P0CJ86 424 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DUX4L4P0CJ87 422 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DUX4L5P0CJ88 424 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DUX4L6P0CJ89 424 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DUX4L7P0CJ90 424 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 CHRNB2P17787 502 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 CNTFP26441 200 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 FXR2P51116 673 aaKnown RBP eCLIP8.31□□□□□ -1.081e-6■■■□□ 15
CRNKL1-205ENST00000496549 PSME3P61289 254 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 FASTKD3Q14CZ7 662 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 NPTX1Q15818 432 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TTC23Q5W5X9 447 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 FAM205BPQ63HN1 556 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 NECAB2Q7Z6G3 386 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DSG4Q86SJ6 1040 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 OFCC1Q8IZS5 231 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC20A1Q8WUM9 679 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PHF21AQ96BD5 680 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 SYTL2Q9HCH5 934 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 ANKHQ9HCJ1 492 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TRMT13Q9NUP7 481 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PCDH10Q9P2E7 1040 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DUX4Q9UBX2 424 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 IP6K2Q9UHH9 426 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 FIS1Q9Y3D6 152 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PCDHGA8Q9Y5G5 932 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 NFAT5O94916 1531 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PRAMEF22A3QJZ6 481 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 H0Y858 1186 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 RNF103O00237 685 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TLR3O15455 904 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 H2AFYO75367 372 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 BCAS2O75934 225 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 BMP3P12645 472 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 IL7P13232 177 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TGM2P21980 687 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 UQCRC1P31930 480 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms