RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 HADHAP40939 763 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 MAGEA9P43362 315 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 CDK7P50613 346 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 NDST2P52849 883 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 CACNA2D1P54289 1103 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 SESN2P58004 480 aaPredicted RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 CREMQ03060 361 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 GAD2Q05329 585 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 GPR17Q13304 367 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 LAMB3Q13751 1172 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 IKBKEQ14164 716 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 EFTUD2Q15029 972 aaKnown RBP eCLIP7.07□□□□□ -1.28
USP39-219ENST00000496047 MTFR1Q15390 333 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 TRIP4Q15650 581 aaPredicted RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 ZKSCAN8Q15776 578 aaPredicted RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 UGP2Q16851 508 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 USP41Q3LFD5 358 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 SYCP2LQ5T4T6 812 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 STEAP4Q687X5 459 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 CNKSR3Q6P9H4 555 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 UNC5AQ6ZN44 842 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 BHLHA9Q7RTU4 235 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 CAND1Q86VP6 1230 aaKnown RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 ZNF280BQ86YH2 543 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 CCDC117Q8IWD4 279 aaPredicted RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 CYP4X1Q8N118 509 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 RTL3Q8N8U3 475 aaKnown RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 CCDC63Q8NA47 563 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 PPHLN1Q8NEY8 458 aaKnown RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 PPP1R14CQ8TAE6 165 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 RAB3IL1Q8TBN0 382 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 ZNF398Q8TD17 642 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 SH3TC2Q8TF17 1288 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 OVCA2Q8WZ82 227 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 CERS2Q96G23 380 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 BTN2A3PQ96KV6 586 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 C1orf74Q96LT6 269 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 CASD1Q96PB1 797 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 TSGA13Q96PP4 275 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 TMEM209Q96SK2 561 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 CPNE1Q99829 537 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 DDX50Q9BQ39 737 aaKnown RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 RHOBTB2Q9BYZ6 727 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 ZYG11BQ9C0D3 744 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 RNF208Q9H0X6 261 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 VPS11Q9H270 941 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 FAM96AQ9H5X1 160 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 FGFR1OP2Q9NVK5 253 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 STARD13Q9Y3M8 1113 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 WDR27A2RRH5 827 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CCT8L1PA6NM43 557 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 KCNU1A8MYU2 1149 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 F5H5T6 163 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 KCNK1O00180 336 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 MATN3O15232 486 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 TIMM44O43615 452 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 TYROBPO43914 113 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 SNX3O60493 162 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 NBNO60934 754 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 ATP5HO75947 161 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 ASMTLO95671 621 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 AMHP03971 560 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 OR4Q2P0C623 313 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CSH1P0DML2 217 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CSH2P0DML3 217 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 HAPLN1P10915 354 aaPredicted RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 RHOQP17081 205 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 NFKB1P19838 968 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 SPRP35270 261 aaPredicted RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 GP5P40197 560 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CCNFP41002 786 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PPP3CCP48454 512 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 MAPKAPK2P49137 400 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 RPIAP49247 311 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 SLC11A1P49279 550 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 SERPINB8P50452 374 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 RENBPP51606 427 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 KPNA2P52292 529 aaKnown RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 RABGGTBP53611 331 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CSE1LP55060 971 aaKnown RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 PDE1BQ01064 536 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 SLC18A2Q05940 514 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 RING1Q06587 406 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 WASHC5Q12768 1159 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 EFEMP1Q12805 493 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 MPP3Q13368 585 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PLD1Q13393 1074 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 FRG1Q14331 258 aaKnown RBP7.06□□□□□ -1.28
USP39-219ENST00000496047 MBTPS1Q14703 1052 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CRYMQ14894 314 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PSMD5Q16401 504 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 RABGAP1LQ5R372 815 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 C10orf120Q5SQS8 335 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 GRTP1Q5TC63 336 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PDPK2PQ6A1A2 396 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 FOXR1Q6PIV2 292 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 CD300LGQ6UXG3 332 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 ZNF534Q76KX8 674 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 TRPM8Q7Z2W7 1104 aa7.06□□□□□ -1.28
USP39-219ENST00000496047 PIGWQ7Z7B1 504 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms