RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 NNMTP40261 264 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 NSFP46459 744 aaKnown RBP10.89□□□□□ -0.67
NELFE-213ENST00000494956 PPP2CBP62714 309 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 PPP2CAP67775 309 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 ZBTB16Q05516 673 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 KIF19Q2TAC6 998 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 PRAMEF14Q5SWL7 426 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 E4F1Q66K89 784 aaPredicted RBP10.89□□□□□ -0.67
NELFE-213ENST00000494956 KIAA0895LQ68EN5 471 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 WDR59Q6PJI9 974 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.89□□□□□ -0.67
NELFE-213ENST00000494956 MON1BQ7L1V2 547 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 RABEPKQ7Z6M1 372 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 DRC7Q8IY82 874 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 PYROXD2Q8N2H3 581 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 SH2D3CQ8N5H7 860 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 OR14C36Q8NHC7 312 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 BAP1Q92560 729 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 SLC6A18Q96N87 628 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 OMDQ99983 421 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 TNKS2Q9H2K2 1166 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 GAREM1Q9H706 876 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 SGK2Q9HBY8 427 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 TM9SF3Q9HD45 589 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 DNAAF2Q9NVR5 837 aaKnown RBP10.89□□□□□ -0.67
NELFE-213ENST00000494956 ADAM22Q9P0K1 906 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 NCKAP1Q9Y2A7 1128 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 FNDC3AQ9Y2H6 1198 aaKnown RBP10.89□□□□□ -0.67
NELFE-213ENST00000494956 SNX11Q9Y5W9 270 aa10.89□□□□□ -0.67
NELFE-213ENST00000494956 CHD5Q8TDI0 1954 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 TCRBV5S1A1TA0A578 114 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 LRRC53A6NM62 1247 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 CCP110O43303 1012 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 ATMINO43313 823 aaPredicted RBP10.88□□□□□ -0.67
NELFE-213ENST00000494956 WNT1P04628 370 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 KRT3P12035 628 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 CEACAM1P13688 526 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 OR1E1P30953 314 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 SDC4P31431 198 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 ZNF165P49910 485 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 ADPRHP54922 357 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 HDAC4P56524 1084 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 RPL7AP62424 266 aaKnown RBP10.88□□□□□ -0.67
NELFE-213ENST00000494956 IL9RQ01113 521 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 OGDHQ02218 1023 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 SULT2A1Q06520 285 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 ELAVL3Q14576 367 aaKnown RBP10.88□□□□□ -0.67
NELFE-213ENST00000494956 IQCB1Q15051 598 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 HLA-BQ31612 363 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 LRRC31Q6UY01 552 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 TRIM72Q6ZMU5 477 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 LEKR1Q6ZMV7 388 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 USP30Q70CQ3 517 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 IRF2BP2Q7Z5L9 587 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 PHF13Q86YI8 300 aaPredicted RBP10.88□□□□□ -0.67
NELFE-213ENST00000494956 NETO2Q8NC67 525 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 CHST14Q8NCH0 376 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 FAM172AQ8WUF8 416 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 C1orf74Q96LT6 269 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 MCEEQ96PE7 176 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 HAPLN3Q96S86 360 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 SYT11Q9BT88 431 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 SPON2Q9BUD6 331 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 SELENOOQ9BVL4 669 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 NEU3Q9UQ49 428 aa10.88□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3DA0A087WVF3 549 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3IA0A087WXS9 549 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3EA0A087X179 549 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3KA0A087X1G2 549 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 A0A1W2PPC4 97 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3FA6NER0 549 aaPredicted RBP10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3LB9A6J9 549 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 CBX4O00257 560 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3HP0C7X1 549 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 GOT1P17174 413 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 GPD1P21695 349 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 C5AR1P21730 350 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 CD27P26842 260 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 MAT2AP31153 395 aaKnown RBP10.87□□□□□ -0.67
NELFE-213ENST00000494956 ADRA1BP35368 520 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 ACVRL1P37023 503 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 PTPN9P43378 593 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 OXCT1P55809 520 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 SIM1P81133 766 aaPredicted RBP10.87□□□□□ -0.67
NELFE-213ENST00000494956 CNTN1Q12860 1018 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 MANEALQ5VSG8 457 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3GQ6DHY5 549 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3CQ6IPX1 549 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 RWDD4Q6NW29 188 aaKnown RBP10.87□□□□□ -0.67
NELFE-213ENST00000494956 ARCQ7LC44 396 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 SETD3Q86TU7 594 aaPredicted RBP10.87□□□□□ -0.67
NELFE-213ENST00000494956 LUZP1Q86V48 1076 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 TBC1D3Q8IZP1 549 aaPredicted RBP10.87□□□□□ -0.67
NELFE-213ENST00000494956 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 OR2A12Q8NGT7 310 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 PIP4K2CQ8TBX8 421 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 OR8D1Q8WZ84 308 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 ARRDC3Q96B67 414 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 BPIFA3Q9BQP9 254 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 ZYG11BQ9C0D3 744 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms