RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 RPS14P62263 151 aaKnown RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 SLC25A11Q02978 314 aaKnown RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 SULT2A1Q06520 285 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 PIGHQ14442 188 aaPredicted RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 ACAP1Q15027 740 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 ZNF783Q6ZMS7 281 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 METTL3Q86U44 580 aaKnown RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 SH2D3CQ8N5H7 860 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 RTL3Q8N8U3 475 aaKnown RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 CTNNBL1Q8WYA6 563 aaPredicted RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 ARHGEF2Q92974 986 aaKnown RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 FAM129BQ96TA1 746 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 ACE2Q9BYF1 805 aaPredicted RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 LUC7LQ9NQ29 371 aaKnown RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 USP36Q9P275 1121 aaKnown RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 CTTNBP2NLQ9P2B4 639 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 UVRAGQ9P2Y5 699 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 SUN2Q9UH99 717 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 IP6K2Q9UHH9 426 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 CYP8B1Q9UNU6 501 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 ACTL7AQ9Y615 435 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 ZNF292O60281 2723 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 ESPNB1AK53 854 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 SMAD6O43541 496 aaKnown RBP17.53■□□□□ 0.4
SNX17-209ENST00000494893 SRCP12931 536 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 DESP17661 470 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 MAGEA1P43355 309 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 ARF5P84085 180 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 SMTNL2Q2TAL5 461 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 KCNT1Q5JUK3 1230 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 PMS2CLQ68D20 193 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 LAIR1Q6GTX8 287 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 LINGO4Q6UY18 593 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 SIPA1Q96FS4 1042 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 EPAS1Q99814 870 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 KLC2Q9H0B6 622 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 RETREG1Q9H6L5 497 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 ITM2CQ9NQX7 267 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 HS3ST2Q9Y278 367 aa17.53■□□□□ 0.4
SNX17-209ENST00000494893 EDDM13A0A1B0GTR0 161 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 TARSL2A2RTX5 802 aaKnown RBP17.52■□□□□ 0.4
SNX17-209ENST00000494893 MYO1FO00160 1098 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 PROSCO94903 275 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 RARAP10276 462 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 GOT1P17174 413 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 TGM1P22735 817 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 VAV2P52735 878 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 TPI1P60174 286 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 DLG2Q15700 870 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 ZNF662Q6ZS27 426 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 KIAA1328Q86T90 577 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 PSTKQ8IV42 348 aaKnown RBP17.52■□□□□ 0.4
SNX17-209ENST00000494893 REXO1L1PQ8IX06 675 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 STK40Q8N2I9 435 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 C17orf53Q8N3J3 647 aaPredicted RBP17.52■□□□□ 0.4
SNX17-209ENST00000494893 SLC35G2Q8TBE7 412 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 RUBCNQ92622 972 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 NCAPGQ9BPX3 1015 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 SPON2Q9BUD6 331 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 C2orf49Q9BVC5 232 aaPredicted RBP17.52■□□□□ 0.4
SNX17-209ENST00000494893 RSPH9Q9H1X1 276 aaPredicted RBP17.52■□□□□ 0.4
SNX17-209ENST00000494893 ATP13A1Q9HD20 1204 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 PARD6AQ9NPB6 346 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 TRMT1Q9NXH9 659 aaKnown RBP17.52■□□□□ 0.4
SNX17-209ENST00000494893 CWC15Q9P013 229 aaKnown RBP17.52■□□□□ 0.4
SNX17-209ENST00000494893 SLC25A13Q9UJS0 675 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 TFR2Q9UP52 801 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 PLXND1Q9Y4D7 1925 aa17.52■□□□□ 0.4
SNX17-209ENST00000494893 USP27XA6NNY8 438 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 EEF2KO00418 725 aaKnown RBP17.51■□□□□ 0.39
SNX17-209ENST00000494893 ZNF821O75541 412 aaPredicted RBP17.51■□□□□ 0.39
SNX17-209ENST00000494893 MTA2O94776 668 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 EPN2O95208 641 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 IGLV3-19P01714 112 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 HTR7P34969 479 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 TPMTP51580 245 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 TAS2R40P59535 323 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 DPYSL2Q16555 572 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 Q6ZVU0 165 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 UMODL1-AS1Q8N2C9 162 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 TXLNBQ8N3L3 684 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 PRCCQ92733 491 aaPredicted RBP17.51■□□□□ 0.39
SNX17-209ENST00000494893 MAGEH1Q9H213 219 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 ZWILCHQ9H900 591 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 FBRSQ9HAH7 460 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 RAB23Q9ULC3 237 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 INTUQ9ULD6 942 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 MFHAS1Q9Y4C4 1052 aa17.51■□□□□ 0.39
SNX17-209ENST00000494893 GVINP1Q7Z2Y8 2422 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 CHD5Q8TDI0 1954 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 GOLGA6L9A6NEM1 432 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 RNF103O00237 685 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 CBX4O00257 560 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 FGF10O15520 208 aaPredicted RBP17.5■□□□□ 0.39
SNX17-209ENST00000494893 PJA2O43164 708 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 ZBTB24O43167 697 aaPredicted RBP17.5■□□□□ 0.39
SNX17-209ENST00000494893 RAMP2O60895 175 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 ZNF217O75362 1048 aa17.5■□□□□ 0.39
SNX17-209ENST00000494893 RETP07949 1114 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms