RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 NUDT5Q9UKK9 219 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 ADAM28Q9UKQ2 775 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 SLC39A10Q9ULF5 831 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 PADI3Q9ULW8 664 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 TSC2P49815 1807 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 MGEA5O60502 916 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 MAGEC1O60732 1142 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 TBX10O75333 385 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 MT-CYBP00156 380 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-209ENST00000494623 NCF2P19878 526 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-209ENST00000494623 MUM1Q2TAK8 710 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 SNX30Q5VWJ9 437 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 FAM171BQ6P995 826 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 OR10T2Q8NGX3 314 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 AGR3Q8TD06 166 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 VAT1Q99536 393 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 SIKE1Q9BRV8 207 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 DMAP1Q9NPF5 467 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-209ENST00000494623 ZNF189O75820 626 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-209ENST00000494623 KLHL2O95198 593 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 HSPA4LO95757 839 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 MPOP05164 745 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 ATP5BP06576 529 aaKnown RBP11.42□□□□□ -0.58
CHMP3-209ENST00000494623 RAP1GDS1P52306 607 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 SLC25A3Q00325 362 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 SLC34A1Q06495 639 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 CDH17Q12864 832 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 NAPEPLDQ6IQ20 393 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 NAPRTQ6XQN6 538 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 KDELC2Q7Z4H8 507 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 ULK2Q8IYT8 1036 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 ZSCAN18Q8TBC5 510 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-209ENST00000494623 NRG4Q8WWG1 115 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 DNAJC9Q8WXX5 260 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 IRGQQ8WZA9 623 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 SOX13Q9UN79 622 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 PLA2G4CQ9UP65 541 aa11.42□□□□□ -0.58
CHMP3-209ENST00000494623 F8W810 466 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
CHMP3-209ENST00000494623 KPNA6O60684 536 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 SIN3BO75182 1162 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 CIB2O75838 187 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 TM7SF2O76062 418 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 ITGB1P05556 798 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 AOC1P19801 751 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 MAGEA12P43365 314 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 PGFP49763 221 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 CDK7P50613 346 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 COG7P83436 770 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 GRM3Q14832 879 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 TBCCQ15814 346 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 DNAL1Q4LDG9 190 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 RABGAP1LQ5R372 815 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 BTBD8Q5XKL5 378 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 MRPL10Q7Z7H8 261 aaKnown RBP11.41□□□□□ -0.58
CHMP3-209ENST00000494623 SERINC5Q86VE9 423 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 ZNF781Q8N8C0 355 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 IPMKQ8NFU5 416 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 CFAP61Q8NHU2 1237 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 VPS39Q96JC1 886 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 ANKRD27Q96NW4 1050 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 NMRAL1Q9HBL8 299 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 MAN1C1Q9NR34 630 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 SHROOM3Q8TF72 1996 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 LOC100653049A0A140TA62 436 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 G3V2L1 256 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 TIMM44O43615 452 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 KRT34O76011 436 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 CTGFP29279 349 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 AVPR1AP37288 418 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 GRIK1P39086 918 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 VHLP40337 213 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 HARS2P49590 506 aaKnown RBP11.41□□□□□ -0.58
CHMP3-209ENST00000494623 POU6F1Q14863 301 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 CFAP157Q5JU67 520 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 OVOS1Q6IE37 1185 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 CD300LGQ6UXG3 332 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 SOCS4Q8WXH5 440 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 OSBPL2Q9H1P3 480 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 BATF3Q9NR55 127 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 TLK1Q9UKI8 766 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 SORCS3Q9UPU3 1222 aa11.41□□□□□ -0.58
CHMP3-209ENST00000494623 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-209ENST00000494623 ZNF195O14628 629 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 NVLO15381 856 aaKnown RBP11.4□□□□□ -0.58
CHMP3-209ENST00000494623 PHGDHO43175 533 aaKnown RBP11.4□□□□□ -0.58
CHMP3-209ENST00000494623 PAGE1O75459 146 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 MOCS2O96007 188 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-209ENST00000494623 ABL2P42684 1182 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 ZNF135P52742 658 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-209ENST00000494623 MGAT3Q09327 533 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 USP10Q14694 798 aaKnown RBP11.4□□□□□ -0.58
CHMP3-209ENST00000494623 TSNAXIP1Q2TAA8 658 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 C6orf163Q5TEZ5 329 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 C1orf146Q5VVC0 180 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 PDPK2PQ6A1A2 396 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 RIPOR1Q6ZS17 1223 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 RASAL3Q86YV0 1011 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 THEM5Q8N1Q8 247 aa11.4□□□□□ -0.58
CHMP3-209ENST00000494623 ATPAF2Q8N5M1 289 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms