RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CCDC114Q96M63 670 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 NOX5Q96PH1 765 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 LGMNQ99538 433 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 PDCL3Q9H2J4 239 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 SARDHQ9UL12 918 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 TRPM6Q9BX84 2022 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 A0A1W2PQU0 124 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 PRAMEF26H0Y7S4 382 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 M0QYT0 321 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 SLC7A4O43246 635 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 LATO43561 262 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 SIGLEC6O43699 453 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 HSF2BPO75031 334 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 ADCY5O95622 1261 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 GNA14O95837 355 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 ALPPL2P10696 532 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 AKT2P31751 481 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 ACTN2P35609 894 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 RECQLP46063 649 aaPredicted RBP9.89□□□□□ -0.83
UBR4-216ENST00000494503 DNA2P51530 1060 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 IRAK1P51617 712 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 RNASE9P60153 205 aaKnown RBP9.89□□□□□ -0.83
UBR4-216ENST00000494503 CXADRP78310 365 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 KRT83P78385 493 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 CCDC15Q0P6D6 951 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 MAPK8IP2Q13387 824 aaPredicted RBP9.89□□□□□ -0.83
UBR4-216ENST00000494503 AUHQ13825 339 aaKnown RBP9.89□□□□□ -0.83
UBR4-216ENST00000494503 EFHC1Q5JVL4 640 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 AGBL4Q5VU57 503 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 CXorf57Q6NSI4 855 aaKnown RBP9.89□□□□□ -0.83
UBR4-216ENST00000494503 TTI2Q6NXR4 508 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 FBXL19Q6PCT2 694 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 PTAR1Q7Z6K3 402 aaPredicted RBP9.89□□□□□ -0.83
UBR4-216ENST00000494503 C1orf131Q8NDD1 294 aaKnown RBP9.89□□□□□ -0.83
UBR4-216ENST00000494503 LMO3Q8TAP4 145 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 PPP1R13BQ96KQ4 1090 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 FEM1AQ9BSK4 669 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 SRRTQ9BXP5 876 aaKnown RBP9.89□□□□□ -0.83
UBR4-216ENST00000494503 SLC4A5Q9BY07 1137 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 NRSN2Q9GZP1 204 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 ABCG4Q9H172 646 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 OSBPL2Q9H1P3 480 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 KDM4CQ9H3R0 1056 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 ERVMER34-1Q9H9K5 563 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 DMTF1Q9Y222 760 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 RAI2Q9Y5P3 530 aa9.89□□□□□ -0.83
UBR4-216ENST00000494503 HELZ2Q9BYK8 2649 aaKnown RBP9.88□□□□□ -0.83
UBR4-216ENST00000494503 PMM2O15305 246 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 SNAP91O60641 907 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 PAGE1O75459 146 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 FGFR1OPO95684 399 aaKnown RBP9.88□□□□□ -0.83
UBR4-216ENST00000494503 C7P10643 843 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 RRM1P23921 792 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 KRT9P35527 623 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 NUDT1P36639 197 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 RXRGP48443 463 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 SULT1E1P49888 294 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 CLDN2P57739 230 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 SNX16P57768 344 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 INSM1Q01101 510 aaPredicted RBP9.88□□□□□ -0.83
UBR4-216ENST00000494503 OVGP1Q12889 678 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 ILKQ13418 452 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 TAF1BQ53T94 588 aaPredicted RBP9.88□□□□□ -0.83
UBR4-216ENST00000494503 ZNF542PQ5EBM4 170 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 SFMBT2Q5VUG0 894 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 LINGO4Q6UY18 593 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 FAM183BPQ6ZVS7 135 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 BEND5Q7L4P6 421 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 TFAP2DQ7Z6R9 452 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 TMEM110Q86TL2 294 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 IQCHQ86VS3 1027 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 TRIM69Q86WT6 500 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 TRIM59Q8IWR1 403 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 SH2D3CQ8N5H7 860 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 STK32AQ8WU08 396 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 FRS2Q8WU20 508 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 FGF11Q92914 225 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 TIGD1Q96MW7 591 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 CPXM1Q96SM3 734 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 PRMT1Q99873 361 aaKnown RBP9.88□□□□□ -0.83
UBR4-216ENST00000494503 SPON2Q9BUD6 331 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 C2orf49Q9BVC5 232 aaPredicted RBP9.88□□□□□ -0.83
UBR4-216ENST00000494503 TNKS2Q9H2K2 1166 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 SYNDIG1Q9H7V2 258 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 PREBQ9HCU5 417 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 UCKL1Q9NWZ5 548 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 DNAJC28Q9NX36 388 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 ARHGAP20Q9P2F6 1191 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 IPO11Q9UI26 975 aaKnown RBP9.88□□□□□ -0.83
UBR4-216ENST00000494503 HS3ST4Q9Y661 456 aa9.88□□□□□ -0.83
UBR4-216ENST00000494503 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 K7ERQ8 282 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 TRIM38O00635 465 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 MCF2LO15068 1137 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 ALOX15BO15296 676 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 ATP9BO43861 1147 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 CLDN11O75508 207 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 MT-CO3P00414 261 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 IGLV3-25P01717 112 aa9.87□□□□□ -0.83
UBR4-216ENST00000494503 MPOP05164 745 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms