RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ZBTB8OSQ8IWT0 167 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 MIER2Q8N344 545 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 SYT8Q8NBV8 401 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ZBTB44Q8NCP5 570 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ZNF461Q8TAF7 563 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 DEPTORQ8TB45 409 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 FATE1Q969F0 183 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 MTMR9Q96QG7 549 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 SOX7Q9BT81 388 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 KIFC3Q9BVG8 833 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 ACE2Q9BYF1 805 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-219ENST00000494323 TM6SF1Q9BZW5 370 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 TMEM60Q9H2L4 133 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 BRD9Q9H8M2 597 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 LMAN1LQ9HAT1 526 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTCD3-219ENST00000494323 MTRRQ9UBK8 725 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 EVLQ9UI08 416 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-219ENST00000494323 DNAI1Q9UI46 699 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 SCOCQ9UIL1 159 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 MAGEL2Q9UJ55 1249 aa5.61□□□□□ -1.51
PTCD3-219ENST00000494323 MROH6A6NGR9 719 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 K7ERI5 159 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 PRRG1O14668 218 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 DAPK3O43293 454 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 TRAPPC3O43617 180 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 NEMFO60524 1076 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 PRKCBP05771 671 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 CYP11B2P19099 503 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 CCNE1P24864 410 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 GDI1P31150 447 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 HOXC13P31276 330 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ELF1P32519 619 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 CSF2RBP32927 897 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 CCR2P41597 374 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 RPS9P46781 194 aaKnown RBP5.6□□□□□ -1.51
PTCD3-219ENST00000494323 KCNC1P48547 511 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 CDK17Q00537 523 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ROR1Q01973 937 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 GUCY1B3Q02153 619 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ME3Q16798 604 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 UPP1Q16831 310 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 FAM187BQ17R55 369 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ZMAT1Q5H9K5 638 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ATF7IP2Q5U623 682 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 PDXDC1Q6P996 788 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 OVCH2Q7RTZ1 564 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 PRR18Q8N4B5 295 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ZBTB34Q8NCN2 500 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 MCPH1Q8NEM0 835 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 FAM3CQ92520 227 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 WASF1Q92558 559 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 NELL1Q92832 810 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 SECISBP2LQ93073 1101 aaKnown RBP5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ZNF512Q96ME7 567 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-219ENST00000494323 PPP1R10Q96QC0 940 aaKnown RBP5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ACO2Q99798 780 aaKnown RBP5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ADPGKQ9BRR6 497 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 TRMT61BQ9BVS5 477 aaKnown RBP5.6□□□□□ -1.51
PTCD3-219ENST00000494323 C2orf40Q9H1Z8 148 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 CYP4F11Q9HBI6 524 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 ZFP14Q9HCL3 533 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 GDE1Q9NZC3 331 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 LIMCH1Q9UPQ0 1083 aa5.6□□□□□ -1.51
PTCD3-219ENST00000494323 MRPS17Q9Y2R5 130 aaKnown RBP5.6□□□□□ -1.51
PTCD3-219ENST00000494323 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.6□□□□□ -1.51
PTCD3-219ENST00000494323 STK36Q9NRP7 1315 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ARHGEF37A1IGU5 675 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 WDR27A2RRH5 827 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ARHGEF35A5YM69 484 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 CCDC169A6NNP5 214 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 PRR5-ARHGAP8B1AHC4 643 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 TBC1D4O60343 1298 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 JAK2O60674 1132 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 LARGE1O95461 756 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 MYL4P12829 197 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 PSMC3P17980 439 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 FCARP24071 287 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 WASP42768 502 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 MAGEA9P43362 315 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 CXCL12P48061 93 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ARHGAP8P85298 464 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 SATB1Q01826 763 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 MEF2AQ02078 507 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 DMWDQ09019 674 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 MGAT5Q09328 741 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 MALLQ13021 153 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 SRSF5Q13243 272 aaKnown RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 BIRC2Q13490 618 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 PCOLCEQ15113 449 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 UAP1L1Q3KQV9 507 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 CYP4A22Q5TCH4 519 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ALKAL1Q6UXT8 129 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 USP45Q70EL2 814 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 LARP4Q71RC2 724 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 DIS3L2Q8IYB7 885 aaKnown RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 UNC5BQ8IZJ1 945 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 PPM1NQ8N819 430 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 CXorf38Q8TB03 319 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms