RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	NDST2	P52849	883 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	CDH6	P55285	790 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	SLC20A2	Q08357	652 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	DMWD	Q09019	674 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	DPYS	Q14117	519 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ELAVL3	Q14576	367 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	IFI16	Q16666	785 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	USP39	Q53GS9	565 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ODF2	Q5BJF6	829 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ZFYVE27	Q5T4F4	411 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	LRRC38	Q5VT99	294 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	TXNRD3NB	Q6F5E7	133 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	TMCO3	Q6UWJ1	677 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	DSG4	Q86SJ6	1040 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	METTL3	Q86U44	580 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ZNF354C	Q86Y25	554 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	LRRC8A	Q8IWT6	810 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	RHOT1	Q8IXI2	618 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	SH2D3C	Q8N5H7	860 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	LZTR1	Q8N653	840 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ATP11C	Q8NB49	1132 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	KCTD6	Q8NC69	237 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ACRBP	Q8NEB7	543 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	OR7D4	Q8NG98	312 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	OR2T3	Q8NH03	318 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	GAB3	Q8WWW8	586 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	PRCC	Q92733	491 aa	Predicted RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ARHGEF2	Q92974	986 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	MYO19	Q96H55	970 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	MRGPRX1	Q96LB2	322 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	CCDC114	Q96M63	670 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	CSPG4P5	Q96PW8	444 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	PSMB7	Q99436	277 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ZNF670	Q9BS34	389 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	CALN1	Q9BXU9	219 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ACE2	Q9BYF1	805 aa	Predicted RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	TPSD1	Q9BZJ3	242 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	PRDM16	Q9HAZ2	1276 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	PCDH18	Q9HCL0	1135 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	NDFIP2	Q9NV92	336 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	CWC15	Q9P013	229 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	SLCO3A1	Q9UIG8	710 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	REXO2	Q9Y3B8	237 aa	Known RBP	10.22	□□□□□ -0.77
MACF1-222	ENST00000494012		R4GN57	208 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	SPAG17	Q6Q759	2223 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	PIEZO1	Q92508	2521 aa		10.22	□□□□□ -0.77
MACF1-222	ENST00000494012	ARHGAP42	A6NI28	874 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	TTC34	A8MYJ7	566 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	RASA4B	C9J798	803 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	PJA2	O43164	708 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	RASA4	O43374	803 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	PSTPIP1	O43586	416 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	KDELR3	O43731	214 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	ATP9B	O43861	1147 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	BUB1B	O60566	1050 aa	Predicted RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	SNAP91	O60641	907 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	SIN3B	O75182	1162 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	ACADM	P11310	421 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	SRC	P12931	536 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	ERCC2	P18074	760 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	NDUFV2	P19404	249 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	NUMB	P49757	651 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	COPA	P53621	1224 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	NAP1L1	P55209	391 aa	Known RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	TAS2R40	P59535	323 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	ZBTB16	Q05516	673 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	SFSWAP	Q12872	951 aa	Known RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	ACCSL	Q4AC99	568 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	ZNF776	Q68DI1	518 aa	Predicted RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	CEP68	Q76N32	757 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	DAAM2	Q86T65	1068 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	VSIG1	Q86XK7	387 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	TMPRSS6	Q8IU80	811 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	ZNF366	Q8N895	744 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	FAM71B	Q8TC56	605 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	CASKIN2	Q8WXE0	1202 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	TSC1	Q92574	1164 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	NKD2	Q969F2	451 aa	Predicted RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	DESI2	Q9BSY9	194 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	TSGA10	Q9BZW7	698 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	CEP44	Q9C0F1	390 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	EPC1	Q9H2F5	836 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	PRSS16	Q9NQE7	514 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	FAM86C1	Q9NVL1	165 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	DDX56	Q9NY93	547 aa	Known RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	RAB23	Q9ULC3	237 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	TFR2	Q9UP52	801 aa		10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.21	□□□□□ -0.77
MACF1-222	ENST00000494012	LRRD1	A4D1F6	860 aa		10.2	□□□□□ -0.78
MACF1-222	ENST00000494012	RCCD1	A6NED2	376 aa		10.2	□□□□□ -0.78
MACF1-222	ENST00000494012	ZNF487	B1APH4	448 aa		10.2	□□□□□ -0.78
MACF1-222	ENST00000494012	PROB1	E7EW31	1015 aa		10.2	□□□□□ -0.78
MACF1-222	ENST00000494012	ALOX15B	O15296	676 aa		10.2	□□□□□ -0.78
MACF1-222	ENST00000494012	ZMPSTE24	O75844	475 aa		10.2	□□□□□ -0.78
MACF1-222	ENST00000494012	DNTT	P04053	509 aa		10.2	□□□□□ -0.78
MACF1-222	ENST00000494012	KRT1	P04264	644 aa		10.2	□□□□□ -0.78
MACF1-222	ENST00000494012	CCDC175	P0C221	793 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms