RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CTNNBL1Q8WYA6 563 aaPredicted RBP11.95□□□□□ -0.5
UBA3-211ENST00000493957 NKD2Q969F2 451 aaPredicted RBP11.95□□□□□ -0.5
UBA3-211ENST00000493957 KLC2Q9H0B6 622 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 EPC1Q9H2F5 836 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 PRSS16Q9NQE7 514 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 TMEM248Q9NWD8 314 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 IP6K2Q9UHH9 426 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 VPS51Q9UID3 782 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 MBD1Q9UIS9 605 aaPredicted RBP11.95□□□□□ -0.5
UBA3-211ENST00000493957 PLA2G4CQ9UP65 541 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 SMG5Q9UPR3 1016 aaKnown RBP11.95□□□□□ -0.5
UBA3-211ENST00000493957 MFHAS1Q9Y4C4 1052 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 ZNF292O60281 2723 aa11.95□□□□□ -0.5
UBA3-211ENST00000493957 LRRK1Q38SD2 2015 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 ILVBLA1L0T0 632 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 LCE2BO14633 110 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 NPC1O15118 1278 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 ZMPSTE24O75844 475 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 ALDH1A2O94788 518 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 SRPRAP08240 638 aaKnown RBP11.94□□□□□ -0.5
UBA3-211ENST00000493957 GOT1P17174 413 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 DESP17661 470 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 PCK1P35558 622 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 GJC1P36383 396 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 P2RY2P41231 377 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 MRE11P49959 708 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 AIF1P55008 147 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 TAS2R40P59535 323 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 TPI1P60174 286 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 GNA12Q03113 381 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 PIGHQ14442 188 aaPredicted RBP11.94□□□□□ -0.5
UBA3-211ENST00000493957 MAP7D1Q3KQU3 841 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 ATP13A4Q4VNC1 1196 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 PPP6R3Q5H9R7 873 aaPredicted RBP11.94□□□□□ -0.5
UBA3-211ENST00000493957 ACBD5Q5T8D3 534 aaPredicted RBP11.94□□□□□ -0.5
UBA3-211ENST00000493957 LEKR1Q6ZMV7 388 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 CEP68Q76N32 757 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 ALYREFQ86V81 257 aaKnown RBP11.94□□□□□ -0.5
UBA3-211ENST00000493957 RTL3Q8N8U3 475 aaKnown RBP11.94□□□□□ -0.5
UBA3-211ENST00000493957 DCAF4L2Q8NA75 395 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 SLC35G2Q8TBE7 412 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 FRS2Q8WU20 508 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 HSPH1Q92598 858 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 EPAS1Q99814 870 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 ANP32EQ9BTT0 268 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 SPON2Q9BUD6 331 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 KLHL11Q9NVR0 708 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 UVRAGQ9P2Y5 699 aa11.94□□□□□ -0.5
UBA3-211ENST00000493957 REXO2Q9Y3B8 237 aaKnown RBP11.94□□□□□ -0.5
UBA3-211ENST00000493957 RCCD1A6NED2 376 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 MYO1FO00160 1098 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 SMAD6O43541 496 aaKnown RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 SYNCRIPO60506 623 aaKnown RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 GFRA3O60609 400 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 PROSCO94903 275 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 LCA5LO95447 670 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 LMNAP02545 664 aaKnown RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 RARAP10276 462 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 SRCP12931 536 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 SSR1P43307 286 aaKnown RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 MAGEA1P43355 309 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 MAPKAPK2P49137 400 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 METAP1P53582 386 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 OXCT1P55809 520 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 ST8SIA6P61647 398 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 ARF5P84085 180 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 MESDQ14696 234 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 HNRNPA1L2Q32P51 320 aaKnown RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 PLK5Q496M5 336 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 C6orf118Q5T5N4 469 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 C9orf64Q5T6V5 341 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 TMPRSS6Q8IU80 811 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 TP53INP2Q8IXH6 220 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 STK40Q8N2I9 435 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 DCLK2Q8N568 766 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 SH2D3CQ8N5H7 860 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 NPWQ8N729 165 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 ACRBPQ8NEB7 543 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 OR2T3Q8NH03 318 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 PTPRN2Q92932 1015 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 ARHGEF2Q92974 986 aaKnown RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 CELF6Q96J87 481 aaKnown RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 DUSP15Q9H1R2 295 aaPredicted RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 PRDM16Q9HAZ2 1276 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 ATP13A1Q9HD20 1204 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.93□□□□□ -0.5
UBA3-211ENST00000493957 CWC15Q9P013 229 aaKnown RBP11.93□□□□□ -0.5
UBA3-211ENST00000493957 SLC25A13Q9UJS0 675 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 CYP8B1Q9UNU6 501 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 HYOU1Q9Y4L1 999 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 TMEM131Q92545 1883 aa11.93□□□□□ -0.5
UBA3-211ENST00000493957 IGHV1OR15-9A0A0B4J2B8 117 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 A0A0U1RQJ8 604 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 RNF103O00237 685 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 CBX4O00257 560 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 EEF2KO00418 725 aaKnown RBP11.92□□□□□ -0.5
UBA3-211ENST00000493957 ATP9BO43861 1147 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 MTA2O94776 668 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 NDUFA10O95299 355 aa11.92□□□□□ -0.5
UBA3-211ENST00000493957 CD160O95971 181 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms