RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 SPDYCQ5MJ68 293 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 ZNF783Q6ZMS7 281 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 STK40Q8N2I9 435 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 FAM129BQ96TA1 746 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 CHP1Q99653 195 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 SNRNP25Q9BV90 132 aaKnown RBP16.55■□□□□ 0.24
SATB1-217ENST00000493952 ATP13A1Q9HD20 1204 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 WSB2Q9NYS7 404 aaPredicted RBP16.55■□□□□ 0.24
SATB1-217ENST00000493952 PCSK1NQ9UHG2 260 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 DNAI1Q9UI46 699 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 AP4E1Q9UPM8 1137 aa16.55■□□□□ 0.24
SATB1-217ENST00000493952 SSU72P8A0A1W2PR75 194 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 CREB3O43889 395 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 RNF8O76064 485 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 DNTTP04053 509 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 CYP1A2P05177 515 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 ZNF806P0C7X5 589 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 EPHB2P29323 1055 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 OXTRP30559 389 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 ZBTB16Q05516 673 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 ZNF33AQ06730 810 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 SF3A2Q15428 464 aaKnown RBP16.54■□□□□ 0.24
SATB1-217ENST00000493952 DLG2Q15700 870 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 SLC18A3Q16572 532 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 CA9Q16790 459 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 ACCSLQ4AC99 568 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 LYSMD4Q5XG99 296 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 LINGO4Q6UY18 593 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 CYP4V2Q6ZWL3 525 aaPredicted RBP16.54■□□□□ 0.24
SATB1-217ENST00000493952 FAM124AQ86V42 546 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 CNGA4Q8IV77 575 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 MMAAQ8IVH4 418 aaKnown RBP16.54■□□□□ 0.24
SATB1-217ENST00000493952 PIGKQ92643 395 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 BTBD6Q96KE9 485 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 EPAS1Q99814 870 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 SPON2Q9BUD6 331 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 NUP85Q9BW27 656 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 GPR174Q9BXC1 333 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 RETREG1Q9H6L5 497 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 VPS45Q9NRW7 570 aa16.54■□□□□ 0.24
SATB1-217ENST00000493952 ZNHIT6Q9NWK9 470 aaKnown RBP16.54■□□□□ 0.24
SATB1-217ENST00000493952 CACNA1EQ15878 2313 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 K7ERQ8 282 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 CBX4O00257 560 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 SMAD6O43541 496 aaKnown RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 PRPSAP2O60256 369 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 RNASEH1O60930 286 aaKnown RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 ZMPSTE24O75844 475 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 ITPKAP23677 461 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 ACVRL1P37023 503 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 ARF5P84085 180 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 LMNB2Q03252 620 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 ELAVL3Q14576 367 aaKnown RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 CST6Q15828 149 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 TTC31Q49AM3 519 aaPredicted RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 ERMARDQ5T6L9 678 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 IL31Q6EBC2 164 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 TCEAL6Q6IPX3 200 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 Q6ZVU0 165 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 RTL3Q8N8U3 475 aaKnown RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 ATP11CQ8NB49 1132 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 TCEAL3Q969E4 200 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 ZNF419Q96HQ0 510 aaPredicted RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 HSPA12BQ96MM6 686 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 PACSIN1Q9BY11 444 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 ACE2Q9BYF1 805 aaPredicted RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 PABPC3Q9H361 631 aaKnown RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 DEF6Q9H4E7 631 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 DHX35Q9H5Z1 703 aaKnown RBP16.53■□□□□ 0.24
SATB1-217ENST00000493952 TMEM74BQ9NUR3 256 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 DMXL1Q9Y485 3027 aa16.53■□□□□ 0.24
SATB1-217ENST00000493952 PATE3B3GLJ2 98 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 AKR1B15C9JRZ8 316 aaPredicted RBP16.52■□□□□ 0.24
SATB1-217ENST00000493952 MID1O15344 667 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 AKR1B10O60218 316 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 RAMP2O60895 175 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 TCF4P15884 667 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 ACSL1P33121 698 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 PSMD8P48556 350 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 ZNF75DP51815 510 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 TPI1P60174 286 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 ACAP1Q15027 740 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 PEAR1Q5VY43 1037 aaPredicted RBP16.52■□□□□ 0.24
SATB1-217ENST00000493952 SYT12Q8IV01 421 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 ARHGEF2Q92974 986 aaKnown RBP16.52■□□□□ 0.24
SATB1-217ENST00000493952 KCTD15Q96SI1 283 aaPredicted RBP16.52■□□□□ 0.24
SATB1-217ENST00000493952 NOL6Q9H6R4 1146 aaKnown RBP16.52■□□□□ 0.24
SATB1-217ENST00000493952 SERGEFQ9UGK8 458 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 PILRBQ9UKJ0 227 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 SCML1Q9UN30 329 aa16.52■□□□□ 0.24
SATB1-217ENST00000493952 A0A1W2PP55 124 aa16.51■□□□□ 0.23
SATB1-217ENST00000493952 EIF3CLB5ME19 914 aaKnown RBP16.51■□□□□ 0.23
SATB1-217ENST00000493952 EEF2KO00418 725 aaKnown RBP16.51■□□□□ 0.23
SATB1-217ENST00000493952 BNIP3LO60238 219 aa16.51■□□□□ 0.23
SATB1-217ENST00000493952 GDF9O60383 454 aa16.51■□□□□ 0.23
SATB1-217ENST00000493952 IL1BP01584 269 aa16.51■□□□□ 0.23
SATB1-217ENST00000493952 IL1R2P27930 398 aa16.51■□□□□ 0.23
SATB1-217ENST00000493952 SLC8A1P32418 973 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms