RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 PDHA1P08559 390 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 IL6RP08887 468 aaPredicted RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 PRR35P0CG20 571 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 PKMP14618 531 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 ATP5DP30049 168 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 FMO4P31512 558 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 TNNT3P45378 269 aaPredicted RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 HNRNPMP52272 730 aaKnown RBP eCLIP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 JAK3P52333 1124 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 MRPL12P52815 198 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 PPP5CP53041 499 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 TPTEP56180 551 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 RRP1P56182 461 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 UBXN2AP68543 259 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 RBP5P82980 135 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 BFSP1Q12934 665 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 CSTF3Q12996 717 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 CYP1B1Q16678 543 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 ERCC6LQ2NKX8 1250 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 ZNF667Q5HYK9 610 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 TMEM63BQ5T3F8 832 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 ERMARDQ5T6L9 678 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 ATG9BQ674R7 924 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 NAPEPLDQ6IQ20 393 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 TCTN3Q6NUS6 607 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 AADACL2Q6P093 401 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 MTFR2Q6P444 385 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 SGMS1Q86VZ5 419 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 DNAAF5Q86Y56 855 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 KIAA2013Q8IYS2 634 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 OR8H3Q8N146 312 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 CPXM2Q8N436 756 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 SYT2Q8N9I0 419 aaPredicted RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 POGLUT1Q8NBL1 392 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 GPR150Q8NGU9 434 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 GOT1L1Q8NHS2 421 aaPredicted RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 RP9Q8TA86 221 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 GABPB2Q8TAK5 448 aaPredicted RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 GSDMBQ8TAX9 411 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 XAGE5Q8WWM1 108 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 FKBP10Q96AY3 582 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 PGAP3Q96FM1 320 aaPredicted RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 PRR11Q96HE9 360 aaPredicted RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 C20orf173Q96LM9 149 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 GNRHR2Q96P88 292 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 TEX101Q9BY14 249 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 MRPL1Q9BYD6 325 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 NDST4Q9H3R1 872 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 SCPEP1Q9HB40 452 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 CPSF2Q9P2I0 782 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 RASAL2Q9UJF2 1139 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 AMFRQ9UKV5 643 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 ZFR2Q9UPR6 939 aaKnown RBP4.71□□□□□ -1.66
GTF3A-208ENST00000493903 SNX5Q9Y5X3 404 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 FLT1P17948 1338 aa4.71□□□□□ -1.66
GTF3A-208ENST00000493903 LRRC53A6NM62 1247 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 A8MV72 311 aaPredicted RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 TTC34A8MYJ7 566 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 AHRRA9YTQ3 701 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 EIF3CLB5ME19 914 aaKnown RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 KCNJ18B7U540 433 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 TAF4O00268 1085 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 CEP104O60308 925 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 KAT7O95251 611 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 MBPP02686 304 aaPredicted RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 RB1P06400 928 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 GALTP07902 379 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 ATP6V1B1P15313 513 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 IFNAR1P17181 557 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 GSTM2P28161 218 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 SLC8A1P32418 973 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 GABRB2P47870 512 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 CLK3P49761 638 aaKnown RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 BLKP51451 505 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 PSMC6P62333 389 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 RAE1P78406 368 aaKnown RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 E2F1Q01094 437 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 IL13RA2Q14627 380 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 COG2Q14746 738 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 PCLAFQ15004 111 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 ADALQ6DHV7 355 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 KRT80Q6KB66 452 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 KYAT3Q6YP21 454 aaKnown RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 FAM43BQ6ZT52 329 aaPredicted RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 GSTA5Q7RTV2 222 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 CCDC186Q7Z3E2 898 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 TADA2BQ86TJ2 420 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 IQCA1Q86XH1 822 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 THNSL1Q8IYQ7 743 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 C12orf76Q8N812 135 aaPredicted RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 TDRD5Q8NAT2 981 aaKnown RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 MSANTD4Q8NCY6 345 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 PGBD1Q96JS3 809 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 SNX18Q96RF0 628 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 FIZ1Q96SL8 496 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 HDHD5Q9BXW7 423 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 C2orf40Q9H1Z8 148 aa4.7□□□□□ -1.66
GTF3A-208ENST00000493903 XAB2Q9HCS7 855 aaKnown RBP4.7□□□□□ -1.66
GTF3A-208ENST00000493903 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms