RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
SMC4-223ENST00000493695 ANKS1BQ7Z6G8 1248 aa4.55□□□□□ -1.68
SMC4-223ENST00000493695 TCP11L2Q8N4U5 519 aa4.55□□□□□ -1.68
SMC4-223ENST00000493695 FAM216AQ8WUB2 273 aa4.55□□□□□ -1.68
SMC4-223ENST00000493695 GFM1Q96RP9 751 aaKnown RBP4.55□□□□□ -1.68
SMC4-223ENST00000493695 NAA15Q9BXJ9 866 aaKnown RBP4.55□□□□□ -1.68
SMC4-223ENST00000493695 MALT1Q9UDY8 824 aa4.55□□□□□ -1.68
SMC4-223ENST00000493695 SERPINI2O75830 405 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 F7P08709 466 aaPredicted RBP4.54□□□□□ -1.68
SMC4-223ENST00000493695 AKT1P31749 480 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 AMTP48728 403 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 TUBA1BP68363 451 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 DDR1Q08345 913 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 CEP85LQ5SZL2 805 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 HEPHL1Q6MZM0 1159 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 TMEM71Q6P5X7 295 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 KSR2Q6VAB6 950 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 CEP76Q8TAP6 659 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 HES6Q96HZ4 224 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 PAAF1Q9BRP4 392 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 TMEM120AQ9BXJ8 343 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 DDX31Q9H8H2 851 aaKnown RBP4.54□□□□□ -1.68
SMC4-223ENST00000493695 HELLSQ9NRZ9 838 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 CEP83Q9Y592 693 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 WDR81Q562E7 1941 aa4.54□□□□□ -1.68
SMC4-223ENST00000493695 TRBV5-7A0A0A0MS05 114 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 GXYLT2A0PJZ3 443 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 PMM2O15305 246 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 ITM2AO43736 263 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 SP1P08047 785 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 NAGAP17050 411 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 C21orf33P30042 268 aaPredicted RBP4.53□□□□□ -1.68
SMC4-223ENST00000493695 ADPRHP54922 357 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 RPL15P61313 204 aaKnown RBP4.53□□□□□ -1.68
SMC4-223ENST00000493695 GRM4Q14833 912 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 SF3B4Q15427 424 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMC4-223ENST00000493695 CCAR1Q8IX12 1150 aaKnown RBP4.53□□□□□ -1.68
SMC4-223ENST00000493695 EXD3Q8N9H8 876 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 SLC35F5Q8WV83 523 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 ZNF333Q96JL9 665 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 EIF2AQ9BY44 585 aaKnown RBP4.53□□□□□ -1.68
SMC4-223ENST00000493695 SPRY4Q9C004 299 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 HIPK3Q9H422 1215 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 SDF2L1Q9HCN8 221 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 IL36RNQ9UBH0 155 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 CDH22Q9UJ99 828 aa4.53□□□□□ -1.68
SMC4-223ENST00000493695 SRPRBQ9Y5M8 271 aaKnown RBP4.53□□□□□ -1.68
SMC4-223ENST00000493695 A0A1W2PPC4 97 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 SERPINB2P05120 415 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 HARSP12081 509 aaKnown RBP4.52□□□□□ -1.69
SMC4-223ENST00000493695 PRIM2P49643 509 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 ZRSR1Q15695 479 aaKnown RBP4.52□□□□□ -1.69
SMC4-223ENST00000493695 SLC30A9Q6PML9 568 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 TMEM200AQ86VY9 491 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 RFLNBQ8N5W9 214 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 RNF152Q8N8N0 203 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 BICD2Q8TD16 824 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 WDR60Q8WVS4 1066 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 ADGRG7Q96K78 797 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 SORBS1Q9BX66 1292 aaKnown RBP4.52□□□□□ -1.69
SMC4-223ENST00000493695 IGSF9Q9P2J2 1179 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 SLC25A13Q9UJS0 675 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 FAM50BQ9Y247 325 aa4.52□□□□□ -1.69
SMC4-223ENST00000493695 LDB2O43679 373 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 LMX1BO60663 402 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 DAOP14920 347 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 IGFBP2P18065 325 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 THPOP40225 353 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 CASP5P51878 434 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 CDH12P55289 794 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 TRAF3Q13114 568 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 ZNF284Q2VY69 593 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 FAM171A1Q5VUB5 890 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 RINT1Q6NUQ1 792 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 MON1BQ7L1V2 547 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 LILRB1Q8NHL6 650 aaPredicted RBP4.51□□□□□ -1.69
SMC4-223ENST00000493695 SPATA20Q8TB22 786 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 CLEC4CQ8WTT0 213 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 ZNF566Q969W8 418 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 TXNDC15Q96J42 360 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 TBCBQ99426 244 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 CA14Q9ULX7 337 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 PHTF1Q9UMS5 762 aa4.51□□□□□ -1.69
SMC4-223ENST00000493695 COPG1Q9Y678 874 aaKnown RBP4.51□□□□□ -1.69
SMC4-223ENST00000493695 SAA2-SAA4A0A096LPE2 208 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 LOC105369274A0A096LPK9 316 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 LOC102723532A0A0G2JNH3 316 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 KIF28PB7ZC32 967 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 CLGNO14967 610 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 DHHO43323 396 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 PLIN1O60240 522 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 TMCC1O94876 653 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 HTR3AP46098 478 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 ALDH18A1P54886 795 aaKnown RBP4.5□□□□□ -1.69
SMC4-223ENST00000493695 FOXL2P58012 376 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 RHAGQ02094 409 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 ZBTB16Q05516 673 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 PICALMQ13492 652 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 PMS2P11Q13670 270 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 KRT71Q3SY84 523 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms