RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 ITGA8P53708 1063 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 GNA12Q03113 381 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 CAV1Q03135 178 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 ZBTB17Q13105 803 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 KCNJ11Q14654 390 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 MORF4L2Q15014 288 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 POLD3Q15054 466 aaPredicted RBP12.94□□□□□ -0.34
VPS52-220ENST00000493674 ANKRD20A2Q5SQ80 823 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
VPS52-220ENST00000493674 C6orf118Q5T5N4 469 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 ANKRD20A1Q5TYW2 823 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 ANKRD20A3Q5VUR7 823 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 IZUMO3Q5VZ72 239 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 TIGD7Q6NT04 549 aaPredicted RBP12.94□□□□□ -0.34
VPS52-220ENST00000493674 EMBQ6PCB8 327 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 GET4Q7L5D6 327 aaPredicted RBP12.94□□□□□ -0.34
VPS52-220ENST00000493674 HOOK3Q86VS8 718 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 TEX26Q8N6G2 289 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 NAT8LQ8N9F0 302 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 SMRP1Q8NCR6 262 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 CCNYQ8ND76 341 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 CCDC110Q8TBZ0 833 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 WFDC5Q8TCV5 224 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 IFT81Q8WYA0 676 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 CPT1BQ92523 772 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 PRCCQ92733 491 aaPredicted RBP12.94□□□□□ -0.34
VPS52-220ENST00000493674 TMA16Q96EY4 203 aaKnown RBP12.94□□□□□ -0.34
VPS52-220ENST00000493674 ALG14Q96F25 216 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 APOL5Q9BWW9 433 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 TXLNGYQ9BZA5 131 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 IPO11Q9UI26 975 aaKnown RBP12.94□□□□□ -0.34
VPS52-220ENST00000493674 CDH7Q9ULB5 785 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 TPX2Q9ULW0 747 aaKnown RBP12.94□□□□□ -0.34
VPS52-220ENST00000493674 OR51B4Q9Y5P0 310 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 CKAP5Q14008 2032 aa12.94□□□□□ -0.34
VPS52-220ENST00000493674 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.93□□□□□ -0.34
VPS52-220ENST00000493674 TYW5A2RUC4 315 aaKnown RBP12.93□□□□□ -0.34
VPS52-220ENST00000493674 KCNK1O00180 336 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 SMAPO00193 183 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 SLC9A3R1O14745 358 aaPredicted RBP12.93□□□□□ -0.34
VPS52-220ENST00000493674 CHADO15335 359 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 ERLIN1O75477 346 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 STK10O94804 968 aaKnown RBP12.93□□□□□ -0.34
VPS52-220ENST00000493674 RHOCP08134 193 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 FAM153BP0C7A2 387 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 CD68P34810 354 aaPredicted RBP12.93□□□□□ -0.34
VPS52-220ENST00000493674 MTHFRP42898 656 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 IFNAR2P48551 515 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 PLTPP55058 493 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 IL10RBQ08334 325 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 CALCOCO2Q13137 446 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 ZNF177Q13360 481 aaPredicted RBP12.93□□□□□ -0.34
VPS52-220ENST00000493674 SEMA5AQ13591 1074 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 FAM153CQ494X1 144 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 MAP9Q49MG5 647 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 TEX44Q53QW1 395 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 ATAT1Q5SQI0 421 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 PCGF5Q86SE9 256 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 PPIL6Q8IXY8 311 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 MREGQ8N565 214 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 CNTD1Q8N815 330 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 SUSD6Q92537 303 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 TEKT5Q96M29 485 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 RIPOR3Q96MK2 946 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 ZNF599Q96NL3 588 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 MYADMQ96S97 322 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 FERMT1Q9BQL6 677 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 GORASP1Q9BQQ3 440 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 FOXP3Q9BZS1 431 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 PHACTR1Q9C0D0 580 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 ARGLU1Q9NWB6 273 aaPredicted RBP12.93□□□□□ -0.34
VPS52-220ENST00000493674 CLDND1Q9NY35 253 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 FAM153AQ9UHL3 310 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 TRHDEQ9UKU6 1024 aa12.93□□□□□ -0.34
VPS52-220ENST00000493674 A0A0D9SEW6 157 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 CXorf51AA0A1B0GTR3 108 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 J3KR12 359 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 KDELR3O43731 214 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ZMPSTE24O75844 475 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 TMEM63AO94886 807 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 METTL18O95568 372 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 CCNB1P14635 433 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 TPSB2P20231 275 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ACTN2P35609 894 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 FDFT1P37268 417 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ETFBP38117 255 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 HNRNPDQ14103 355 aaKnown RBP12.92□□□□□ -0.34
VPS52-220ENST00000493674 HLTFQ14527 1009 aaKnown RBP eCLIP12.92□□□□□ -0.34
VPS52-220ENST00000493674 TPSAB1Q15661 275 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 AAK1Q2M2I8 961 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ANO4Q32M45 955 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 EML3Q32P44 896 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 FSCBQ5H9T9 825 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ANKRD22Q5VYY1 191 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ARHGEF18Q6ZSZ5 1173 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 ZCCHC9Q8N567 271 aaKnown RBP12.92□□□□□ -0.34
VPS52-220ENST00000493674 OR7D4Q8NG98 312 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 FIBINQ8TAL6 211 aa12.92□□□□□ -0.34
VPS52-220ENST00000493674 OSCP1Q8WVF1 389 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms