RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 EZH1Q92800 747 aaPredicted RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 EDAQ92838 391 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 C2orf49Q9BVC5 232 aaPredicted RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 LTB4R2Q9NPC1 389 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 ELOVL2Q9NXB9 296 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 DTLQ9NZJ0 730 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 MTF2Q9Y483 593 aaPredicted RBP16.11■□□□□ 0.17
HPS4-216ENST00000493455 SAR1BQ9Y6B6 198 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 F5P12259 2224 aa16.11■□□□□ 0.17
HPS4-216ENST00000493455 MYO18AQ92614 2054 aaKnown RBP16.1■□□□□ 0.17
HPS4-216ENST00000493455 SHISA7A6NL88 538 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 FAM170BA6NMN3 283 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 H7C0C1 242 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 J3KR12 359 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 K7EQS6 105 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 APOC4-APOC2K7ER74 178 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 BNIP3LO60238 219 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 RNF40O75150 1001 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 PDGFBP01127 241 aaPredicted RBP16.1■□□□□ 0.17
HPS4-216ENST00000493455 APOC2P02655 101 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 ATP5BP06576 529 aaKnown RBP16.1■□□□□ 0.17
HPS4-216ENST00000493455 ATP5OP48047 213 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 AP1B1Q10567 949 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 SERINC3Q13530 473 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 ACCSLQ4AC99 568 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 FAM182AQ5T1J6 154 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 PAPD7Q5XG87 772 aaKnown RBP16.1■□□□□ 0.17
HPS4-216ENST00000493455 AFMIDQ63HM1 303 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 EGFLAMQ63HQ2 1017 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 ZNF366Q8N895 744 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 ZNF513Q8N8E2 541 aaPredicted RBP16.1■□□□□ 0.17
HPS4-216ENST00000493455 DCAF4L2Q8NA75 395 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 ACTL9Q8TC94 416 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 USP33Q8TEY7 942 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 ALG14Q96F25 216 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 C10orf88Q9H8K7 445 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 SEPT10Q9P0V9 454 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 IPO11Q9UI26 975 aaKnown RBP16.1■□□□□ 0.17
HPS4-216ENST00000493455 ERVW-1Q9UQF0 538 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 R3HDM2Q9Y2K5 976 aaKnown RBP16.1■□□□□ 0.17
HPS4-216ENST00000493455 OR51B4Q9Y5P0 310 aa16.1■□□□□ 0.17
HPS4-216ENST00000493455 ESPNB1AK53 854 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
HPS4-216ENST00000493455 PGRMC1O00264 195 aaKnown RBP16.09■□□□□ 0.17
HPS4-216ENST00000493455 KDELR3O43731 214 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 URI1O94763 535 aaPredicted RBP16.09■□□□□ 0.17
HPS4-216ENST00000493455 ALADP13716 330 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 GARSP41250 739 aaKnown RBP16.09■□□□□ 0.17
HPS4-216ENST00000493455 PLK1P53350 603 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 STARD6P59095 220 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 ST8SIA6P61647 398 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 ARF5P84085 180 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 ECT2LQ008S8 904 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 GALNT2Q10471 571 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 SNX1Q13596 522 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 PDK1Q15118 436 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 TRIM67Q6ZTA4 783 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 KIAA0907Q7Z7F0 614 aaPredicted RBP16.09■□□□□ 0.17
HPS4-216ENST00000493455 ATP11CQ8NB49 1132 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 C1orf54Q8WWF1 131 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 ATG4AQ8WYN0 398 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 LGMNQ99538 433 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 AP1M1Q9BXS5 423 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 ACE2Q9BYF1 805 aaPredicted RBP16.09■□□□□ 0.17
HPS4-216ENST00000493455 LMAN1LQ9HAT1 526 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 PRDM16Q9HAZ2 1276 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 UBA2Q9UBT2 640 aaPredicted RBP16.09■□□□□ 0.17
HPS4-216ENST00000493455 PLA2G4CQ9UP65 541 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 EFR3BQ9Y2G0 817 aa16.09■□□□□ 0.17
HPS4-216ENST00000493455 K7ERQ8 282 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 PPP1R12AO14974 1030 aaPredicted RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 MCF2LO15068 1137 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 NEBLO76041 1014 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 KLF8O95600 359 aaPredicted RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 ASLP04424 464 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 DLDP09622 509 aaKnown RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 HLA-EP13747 358 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 MX2P20592 715 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 TNFRSF4P43489 277 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 EIF3EP60228 445 aaKnown RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 SULT2A1Q06520 285 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 LRRC32Q14392 662 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 ZNF234Q14588 700 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 EIF4HQ15056 248 aaKnown RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 NOMO1Q15155 1222 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 DNTTIP2Q5QJE6 756 aaKnown RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 RETSATQ6NUM9 610 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 SERPINA13PQ6UXR4 307 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 Q6ZS52 159 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 BZW1Q7L1Q6 419 aaKnown RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 CHPFQ8IZ52 775 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 RPLP0P6Q8NHW5 317 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 NSMCE1Q8WV22 266 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 TTC17Q96AE7 1141 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 ACOX2Q99424 681 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 CACNA2D2Q9NY47 1150 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 FCF1Q9Y324 198 aaKnown RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 TTLL3Q9Y4R7 772 aa16.08■□□□□ 0.16
HPS4-216ENST00000493455 MUC22E2RYF6 1773 aaPredicted RBP16.08■□□□□ 0.16
HPS4-216ENST00000493455 TMEM221A6NGB7 291 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms