RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 RASA4O43374 803 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 BUB1O43683 1085 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 SPOPO43791 374 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 BUB1BO60566 1050 aaPredicted RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 LILRB5O75023 590 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 SIN3BO75182 1162 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 RPP40O75818 363 aaKnown RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 MT-CO1P00395 513 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 COMTP21964 271 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 AMPD1P23109 780 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 NBL1P41271 181 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 NDST2P52849 883 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 KIF5AQ12840 1032 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 BYSLQ13895 437 aaKnown RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 SIM2Q14190 667 aaPredicted RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 PDK2Q15119 407 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 DLG2Q15700 870 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 PARP15Q460N3 678 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 ODF2Q5BJF6 829 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 PRR23BQ6ZRT6 265 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 LRRC8AQ8IWT6 810 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 UMODL1-AS1Q8N2C9 162 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 SH2D3CQ8N5H7 860 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 GAB3Q8WWW8 586 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 SIPA1Q96FS4 1042 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 CELF6Q96J87 481 aaKnown RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 CALR3Q96L12 384 aaKnown RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 CSPG4P5Q96PW8 444 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 CALN1Q9BXU9 219 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 ACE2Q9BYF1 805 aaPredicted RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 LACRTQ9GZZ8 138 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 MKRN2Q9H000 416 aaKnown RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 SEMA4AQ9H3S1 761 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 KLHL11Q9NVR0 708 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 HS3ST2Q9Y278 367 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 HYOU1Q9Y4L1 999 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 ALG6Q9Y672 507 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 DUSP10Q9Y6W6 482 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 MIA3Q5JRA6 1907 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 K7ERQ8 282 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 ARHGAP6O43182 974 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 KDELR3O43731 214 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 ATP9BO43861 1147 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 BNIP3LO60238 219 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 RNASEH1O60930 286 aaKnown RBP14.28□□□□□ -0.12
CCM2-217ENST00000492883 ZMPSTE24O75844 475 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 ACADMP11310 421 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 SRCP12931 536 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 CLCN6P51797 869 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 COPAP53621 1224 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 GEMIN4P57678 1058 aaKnown RBP14.28□□□□□ -0.12
CCM2-217ENST00000492883 ARF5P84085 180 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 MMRN1Q13201 1228 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 DPYSQ14117 519 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 C9orf64Q5T6V5 341 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 CACUL1Q86Y37 369 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 RHOT1Q8IXI2 618 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 LZTR1Q8N653 840 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 RLN3Q8WXF3 142 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 PTPRN2Q92932 1015 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 NKD2Q969F2 451 aaPredicted RBP14.28□□□□□ -0.12
CCM2-217ENST00000492883 HMCESQ96FZ2 354 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 SPACA7Q96KW9 195 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 SLC39A8Q9C0K1 460 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 NOL6Q9H6R4 1146 aaKnown RBP14.28□□□□□ -0.12
CCM2-217ENST00000492883 FBRSQ9HAH7 460 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 RCOR3Q9P2K3 495 aaPredicted RBP14.28□□□□□ -0.12
CCM2-217ENST00000492883 RAB23Q9ULC3 237 aa14.28□□□□□ -0.12
CCM2-217ENST00000492883 TRIOO75962 3097 aa14.27□□□□□ -0.12
CCM2-217ENST00000492883 ARHGAP42A6NI28 874 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 BTNL10A8MVZ5 291 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 DFFAO00273 331 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 DCLK1O15075 740 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 PJA2O43164 708 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 MAP3K13O43283 966 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 ZNF217O75362 1048 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 CD48P09326 243 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 VAV1P15498 845 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 IL4RP24394 825 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
CCM2-217ENST00000492883 DNA2P51530 1060 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 ARSEP51690 589 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 DPYSL3Q14195 570 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 IFI16Q16666 785 aaKnown RBP14.27□□□□□ -0.13
CCM2-217ENST00000492883 LRRC38Q5VT99 294 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 ZNF776Q68DI1 518 aaPredicted RBP14.27□□□□□ -0.13
CCM2-217ENST00000492883 LEKR1Q6ZMV7 388 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 DAAM2Q86T65 1068 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 STK40Q8N2I9 435 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 TPCN2Q8NHX9 752 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 FAM71BQ8TC56 605 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 FRS2Q8WU20 508 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 RAPGEF5Q92565 580 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 TSC1Q92574 1164 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 PHOX2BQ99453 314 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 GOLPH3Q9H4A6 298 aa14.27□□□□□ -0.13
CCM2-217ENST00000492883 SALL4Q9UJQ4 1053 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms