RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 POU5F1Q01860 360 aaKnown RBP5.56□□□□□ -1.52
SEC13-219ENST00000492602 ARHGAP44Q17R89 818 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 PRRT3Q5FWE3 981 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 CXXC5Q7LFL8 322 aaKnown RBP5.56□□□□□ -1.52
SEC13-219ENST00000492602 KIAA0907Q7Z7F0 614 aaPredicted RBP5.56□□□□□ -1.52
SEC13-219ENST00000492602 ABI3BPQ7Z7G0 1075 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 TADA2BQ86TJ2 420 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 FAM35AQ86V20 835 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 RBFAQ8N0V3 343 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 ARL10Q8N8L6 244 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 B3GALNT2Q8NCR0 500 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 BTN2A2Q8WVV5 523 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 HDAC11Q96DB2 347 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 C19orf60Q96EN9 201 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 TMA16Q96EY4 203 aaKnown RBP5.56□□□□□ -1.52
SEC13-219ENST00000492602 MTMR12Q9C0I1 747 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 TCEAL2Q9H3H9 227 aaPredicted RBP5.56□□□□□ -1.52
SEC13-219ENST00000492602 GSX1Q9H4S2 264 aaPredicted RBP5.56□□□□□ -1.52
SEC13-219ENST00000492602 APOBEC3BQ9UH17 382 aaKnown RBP5.56□□□□□ -1.52
SEC13-219ENST00000492602 SIX4Q9UIU6 781 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 NAGPAQ9UK23 515 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 DOLKQ9UPQ8 538 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 KIF3AQ9Y496 699 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 PCDHGA3Q9Y5H0 932 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 B3GALT1Q9Y5Z6 326 aa5.56□□□□□ -1.52
SEC13-219ENST00000492602 OAS3Q9Y6K5 1087 aaKnown RBP5.56□□□□□ -1.52
SEC13-219ENST00000492602 DIDO1Q9BTC0 2240 aaKnown RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 NPHP3-ACAD11A0A0J9YXS1 232 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 VWA3AA6NCI4 1184 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 POM121BA6NF01 834 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 KIAA1324LA8MWY0 1029 aaPredicted RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 LMO7DNF2Z398 122 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 LRRTM2O43300 516 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 ZG16O60844 167 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 PPP6R2O75170 966 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 DNAJB5O75953 348 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 BEST1O76090 585 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 FGF3P11487 239 aaPredicted RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 COX6B1P14854 86 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 BPIP17213 487 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 CAPN3P20807 821 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 FECHP22830 423 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 CSKP41240 450 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 ART1P52961 327 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 MAP3K7CLP57077 242 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 ANAPC15P60006 121 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 GUCY1B3Q02153 619 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 EFEMP1Q12805 493 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 CNTN1Q12860 1018 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 PDE1CQ14123 709 aaPredicted RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 ELAVL3Q14576 367 aaKnown RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 ZRSR1Q15695 479 aaKnown RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 EFHC2Q5JST6 749 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 AGBL4Q5VU57 503 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 SLFN12LQ6IEE8 588 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 PAQR9Q6ZVX9 377 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 RD3Q7Z3Z2 195 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 KCNK18Q7Z418 384 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 KDELC2Q7Z4H8 507 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 CCNJLQ8IV13 435 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 SLITRK4Q8IW52 837 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 NLGN4XQ8N0W4 816 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 KYQ8NBH2 561 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 RCBTB1Q8NDN9 531 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 ZMIZ2Q8NF64 920 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 NLGN4YQ8NFZ3 816 aaPredicted RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 WFDC5Q8TCV5 224 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 POMGNT1Q8WZA1 660 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 JAKMIP2Q96AA8 810 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 FAM131CQ96AQ9 280 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 SMARCD1Q96GM5 515 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 MRGPRX3Q96LB0 322 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 BMFQ96LC9 184 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 FAM213AQ9BRX8 229 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 SRRTQ9BXP5 876 aaKnown RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 RAB34Q9BZG1 259 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 UPF2Q9HAU5 1272 aaKnown RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 KRT82Q9NSB4 513 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.55□□□□□ -1.52
SEC13-219ENST00000492602 PPP4R2Q9NY27 417 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 SLCO3A1Q9UIG8 710 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 CROTQ9UKG9 612 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 PILRAQ9UKJ1 303 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 SCML2Q9UQR0 700 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 CEP83Q9Y592 693 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 PCDHB3Q9Y5E6 796 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 PCDHA5Q9Y5H7 936 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 MRPS18BQ9Y676 258 aaKnown RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 CSPG4Q6UVK1 2322 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 ZNF106Q9H2Y7 1883 aaKnown RBP5.55□□□□□ -1.52
SEC13-219ENST00000492602 RTTNQ86VV8 2226 aa5.55□□□□□ -1.52
SEC13-219ENST00000492602 TACC2O95359 2948 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 SPINT1O43278 529 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 TACC1O75410 805 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 ASLP04424 464 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 RALAP11233 206 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 TSHRP16473 764 aa5.54□□□□□ -1.52
SEC13-219ENST00000492602 MAP4P27816 1152 aaKnown RBP5.54□□□□□ -1.52
SEC13-219ENST00000492602 ADRA1BP35368 520 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms