RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 COQ4Q9Y3A0 265 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 PCDHB12Q9Y5F1 795 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 SNX13Q9Y5W8 968 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 CXorf49A8MYA2 514 aaPredicted RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 AP3B1O00203 1094 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 PLIN3O60664 434 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 UGT2B11O75310 529 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 GLRA3O75311 464 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 CSPG5O95196 566 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 KRT1P04264 644 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ARRB2P32121 409 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ARCN1P48444 511 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 GDF10P55107 478 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ILF2Q12905 390 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 MAMLD1Q13495 774 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 STILQ15468 1287 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 PCSK7Q16549 785 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 INSCQ1MX18 579 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 LIN9Q5TKA1 542 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 POLNQ7Z5Q5 900 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 MYCT1Q8N699 235 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 TGFBRAP1Q8WUH2 860 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 HDAC11Q96DB2 347 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 C8orf48Q96LL4 319 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 VPS35Q96QK1 796 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 NOL11Q9H8H0 719 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 IP6K2Q9UHH9 426 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 SARDHQ9UL12 918 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 TESPA1A2RU30 521 aaPredicted RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 CCRL2O00421 344 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 MEIS1O00470 390 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 AVILO75366 819 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 TOMM70O94826 608 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 KCNH1O95259 989 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 DDX5P17844 614 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 IMPDH1P20839 514 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 FGFR3P22607 806 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 MSX2P35548 267 aaPredicted RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 RPL10AP62906 217 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 CHRNDQ07001 517 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 KCNJ11Q14654 390 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 NEDD8Q15843 81 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 SLC9B1Q4ZJI4 515 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 CCNYL2Q5T2Q4 361 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 UBE2UQ5VVX9 321 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ZCCHC8Q6NZY4 707 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 AFAP1L2Q8N4X5 818 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 ZFP90Q8TF47 636 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 USP13Q92995 863 aaPredicted RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 PBXIP1Q96AQ6 731 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 NOL6Q9H6R4 1146 aaKnown RBP9.87□□□□□ -0.83
VPS8-225ENST00000492449 PLAC1Q9HBJ0 212 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 VAT1LQ9HCJ6 419 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 DIABLOQ9NR28 239 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 AASDHPPTQ9NRN7 309 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 SPEF1Q9Y4P9 236 aa9.87□□□□□ -0.83
VPS8-225ENST00000492449 TNPO2O14787 897 aaKnown RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 TRIM24O15164 1050 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 PHGDHO43175 533 aaKnown RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 CCND2P30279 289 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 POLR2IP36954 125 aaKnown RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 PTPN9P43378 593 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 GCLMP48507 274 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 TAGLNQ01995 201 aaKnown RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 CNTN2Q02246 1040 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 FSTL1Q12841 308 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 MMRN1Q13201 1228 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 NAB1Q13506 487 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 AQP6Q13520 282 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 ASPRV1Q53RT3 343 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 NXNQ6DKJ4 435 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 TATDN1Q6P1N9 297 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 UNC5AQ6ZN44 842 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 SLC16A12Q6ZSM3 486 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 SPRED1Q7Z699 444 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 ZBTB46Q86UZ6 589 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 BEND7Q8N7W2 519 aaPredicted RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 MARVELD3Q96A59 401 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 DYNLL2Q96FJ2 89 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 BEGAINQ9BUH8 593 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 GLT8D2Q9H1C3 349 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 TOPORSQ9NS56 1045 aaPredicted RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 HOMER2Q9NSB8 354 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 TBC1D22BQ9NU19 505 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 PKD2L2Q9NZM6 624 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 PNMA6FA0A0J9YX94 578 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 FAM159BA6NKW6 160 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 PI4K2BG5E9Z4 385 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 CHADO15335 359 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 ZW10O43264 779 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 MTSS1O43312 755 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 ABCB7O75027 752 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 BCAS1O75363 584 aaPredicted RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 GSNP06396 782 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 HSPA1AP0DMV8 641 aaKnown RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 HSPA1BP0DMV9 641 aaKnown RBP9.86□□□□□ -0.83
VPS8-225ENST00000492449 BMP4P12644 408 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 IL32P24001 234 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 GSTM2P28161 218 aa9.86□□□□□ -0.83
VPS8-225ENST00000492449 CD40LGP29965 261 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms