RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 ABHD2P08910 425 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CSH1P0DML2 217 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CSH2P0DML3 217 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 NR2F1P10589 423 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 GHRP10912 638 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 TNNI1P19237 187 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ACSL1P33121 698 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CDH5P33151 784 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 PTPN7P35236 360 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ARL3P36405 182 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 MLH1P40692 756 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SKIV2L2P42285 1042 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 NSFP46459 744 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 KCNJ1P48048 391 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 RPIAP49247 311 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 EFNA5P52803 228 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SEC24CP53992 1094 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 POLGP54098 1239 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 VAMP2P63027 116 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 NOP14P78316 857 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SRSF2Q01130 221 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SP2Q02086 613 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 KRT17Q04695 432 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 UBE3AQ05086 875 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 MAP4K2Q12851 820 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CALCOCO2Q13137 446 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CBX3Q13185 183 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 MAMLD1Q13495 774 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ACVR2BQ13705 512 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CAPSQ13938 189 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 EFR3AQ14156 821 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 NFE2L1Q14494 772 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 NEDD9Q14511 834 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SLC29A2Q14542 456 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ADIPOQQ15848 244 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ALG11Q2TAA5 492 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 C2orf76Q3KRA6 126 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 LACTB2Q53H82 288 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 TMEM177Q53S58 311 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SGO2Q562F6 1265 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 TOR2AQ5JU69 321 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ATPAF1Q5TC12 328 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 LRRC38Q5VT99 294 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SNX30Q5VWJ9 437 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 FAM160B1Q5W0V3 765 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 AP1ARQ63HQ0 302 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 DRICH1Q6PGQ1 229 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 KCNT2Q6UVM3 1135 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 TRMT1LQ7Z2T5 733 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 PIWIL3Q7Z3Z3 882 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 DEFB132Q7Z7B7 95 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CPLX4Q7Z7G2 160 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 RIOX2Q8IUF8 465 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 WDR49Q8IV35 697 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 RHOT1Q8IXI2 618 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 THNSL1Q8IYQ7 743 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ANKRD35Q8N283 1001 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 EFHBQ8N7U6 833 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 RNF152Q8N8N0 203 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 BBOF1Q8ND07 529 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 AGBL5Q8NDL9 886 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 DENND6BQ8NEG7 585 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 Q8NFD4 153 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 OR5B17Q8NGF7 314 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 EXD1Q8NHP7 514 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 FEZF2Q8TBJ5 459 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SUN5Q8TC36 379 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CPA5Q8WXQ8 436 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 P3H4Q92791 437 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ZKSCAN4Q969J2 545 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 TMEM143Q96AN5 459 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CHMP6Q96FZ7 201 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SNF8Q96H20 258 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ZBTB45Q96K62 511 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 FAM84AQ96KN4 292 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ZFRQ96KR1 1074 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 FAM167AQ96KS9 214 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 MRGPRX3Q96LB0 322 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 RMDN2Q96LZ7 410 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SLC6A18Q96N87 628 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 SERPINB12Q96P63 405 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ZNF317Q96PQ6 595 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 MSTO1Q9BUK6 570 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 OSBPL8Q9BZF1 889 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 TRIM7Q9C029 511 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 KLHL25Q9H0H3 589 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CDC42EP4Q9H3Q1 356 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CENPHQ9H3R5 247 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 MS4A5Q9H3V2 200 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 AZI2Q9H6S1 392 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 EPS8L2Q9H6S3 715 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ACTR5Q9H9F9 607 aaPredicted RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 ERVMER34-1Q9H9K5 563 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 PPANQ9NQ55 473 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 CHST7Q9NS84 486 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 NRBP2Q9NSY0 501 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 WBP1LQ9NX94 342 aa3.89□□□□□ -1.79
ATPAF1-206ENST00000492233 RBAKQ9NYW8 714 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms