RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 SIGLEC16A6NMB1 481 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 TTC34A8MYJ7 566 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 GOLGA8SH3BPF8 625 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 DDX3XO00571 662 aaKnown RBP eCLIP11.35□□□□□ -0.592e-10■■■■□ 21.8
TMEM39A-211ENST00000491685 KCNK3O14649 394 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 FSBPO95073 299 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 LUC7L3O95232 432 aaKnown RBP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 IGLV3-25P01717 112 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 IGHV4-34P06331 123 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 TACR2P21452 398 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 MATKP42679 507 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 IRAK1P51617 712 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 SLC14A1Q13336 389 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 SLC18A3Q16572 532 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 PTPN20Q4JDL3 420 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 ZC3H12AQ5D1E8 599 aaKnown RBP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 PITRM1Q5JRX3 1037 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 FAM102AQ5T9C2 384 aaPredicted RBP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 ZNF776Q68DI1 518 aaPredicted RBP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 DNAJC24Q6P3W2 148 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 FAM183BPQ6ZVS7 135 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 SLC26A9Q7LBE3 791 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 SLCO6A1Q86UG4 719 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 XYLT1Q86Y38 959 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 APCDD1Q8J025 514 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 LGI2Q8N0V4 545 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 DEFB106AQ8N104 65 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 TC2NQ8N9U0 490 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 BAHD1Q8TBE0 780 aaPredicted RBP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 AZIN2Q96A70 460 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 TTC17Q96AE7 1141 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 BAG1Q99933 345 aaPredicted RBP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 C11orf70Q9BRQ4 267 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 ISCUQ9H1K1 167 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 RSPH9Q9H1X1 276 aaPredicted RBP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 PABPC3Q9H361 631 aaKnown RBP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 TM9SF3Q9HD45 589 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 TM7SF3Q9NS93 570 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 TOR4AQ9NXH8 423 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 ARHGAP20Q9P2F6 1191 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 LCMT1Q9UIC8 334 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 BTBD3Q9Y2F9 522 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 SNX11Q9Y5W9 270 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 SCINQ9Y6U3 715 aa11.35□□□□□ -0.59
TMEM39A-211ENST00000491685 H0Y626 953 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 MID1O15344 667 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 TRIM16O95361 564 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 CER1O95813 267 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 TRUB2O95900 331 aaKnown RBP11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 DNTTP04053 509 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 CAPNS1P04632 268 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 ATP5BP06576 529 aaKnown RBP11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 H2AFZP0C0S5 128 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 VAV1P15498 845 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 PDGFRAP16234 1089 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 ABCB4P21439 1286 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 SDC4P31431 198 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 GGCXP38435 758 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 STK19P49842 368 aaPredicted RBP11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 METAP1P53582 386 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 NNTQ13423 1086 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 EIF4EBP2Q13542 120 aaPredicted RBP11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 CDH18Q13634 790 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 HNRNPA1L2Q32P51 320 aaKnown RBP11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 C9orf64Q5T6V5 341 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 ACBD5Q5T8D3 534 aaPredicted RBP11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 WDR59Q6PJI9 974 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 H2AFVQ71UI9 128 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 CHSY1Q86X52 802 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 C3orf20Q8ND61 904 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 CTNNBL1Q8WYA6 563 aaPredicted RBP11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 CHP1Q99653 195 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 BTBD1Q9H0C5 482 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 PCED1AQ9H1Q7 454 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 EBF2Q9HAK2 575 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 SLCO3A1Q9UIG8 710 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 ERVW-1Q9UQF0 538 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 ASH1LQ9NR48 2969 aaKnown RBP11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 KNL1Q8NG31 2342 aa11.34□□□□□ -0.59
TMEM39A-211ENST00000491685 SYNJ2BP-COX16A0A087WUM0 186 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 A0A087X0T9 212 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 A0A1W2PP55 124 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 FAM170AA1A519 330 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 FAM221BA6H8Z2 402 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 M0QYT0 321 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 GRAP2O75791 330 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 RNF8O76064 485 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 APOEP02649 317 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 PTMAP06454 111 aaKnown RBP11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 FAM228BP0C875 321 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 ZNF883P0CG24 379 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 MZF1P28698 734 aaPredicted RBP11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 MAGEA1P43355 309 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 AFF3P51826 1226 aaKnown RBP11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 GSCP56915 257 aaPredicted RBP11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 KRT83P78385 493 aa11.33□□□□□ -0.6
TMEM39A-211ENST00000491685 IL9RQ01113 521 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms