RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 YWHAEP62258 255 aaKnown RBP13.61□□□□□ -0.23
USF1-206ENST00000491629 SKOR1P84550 965 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 DAB2P98082 770 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 CENPCQ03188 943 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 RNF219Q5W0B1 726 aaPredicted RBP13.61□□□□□ -0.23
USF1-206ENST00000491629 ANKRD40Q6AI12 368 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 Q6ZVU0 165 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 FAM181AQ8N9Y4 354 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 PRR11Q96HE9 360 aaPredicted RBP13.61□□□□□ -0.23
USF1-206ENST00000491629 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 POLR1BQ9H9Y6 1135 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 KLHL11Q9NVR0 708 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 PCDHB4Q9Y5E5 795 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 TRIM49BA6NDI0 452 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 B8ZZF3 427 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 MCF2LO15068 1137 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 SLC16A3O15427 465 aaKnown RBP13.6□□□□□ -0.23
USF1-206ENST00000491629 LZTS3O60299 673 aaPredicted RBP13.6□□□□□ -0.23
USF1-206ENST00000491629 MAGEC1O60732 1142 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 RNGTTO60942 597 aaKnown RBP13.6□□□□□ -0.23
USF1-206ENST00000491629 TRUB2O95900 331 aaKnown RBP13.6□□□□□ -0.23
USF1-206ENST00000491629 MT-CO1P00395 513 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 TBXAS1P24557 533 aaPredicted RBP13.6□□□□□ -0.23
USF1-206ENST00000491629 NUDT1P36639 197 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 CLDN2P57739 230 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 SLC12A1Q13621 1099 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 TAF5Q15542 800 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 DLG2Q15700 870 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 ZNF284Q2VY69 593 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 SETMARQ53H47 684 aaPredicted RBP13.6□□□□□ -0.23
USF1-206ENST00000491629 GCNT7Q6ZNI0 430 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 KCNE4Q8WWG9 221 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 OR8D1Q8WZ84 308 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 SNX21Q969T3 373 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 ARRDC3Q96B67 414 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 FAM149B1Q96BN6 582 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 VCPIP1Q96JH7 1222 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 BTN2A3PQ96KV6 586 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 OSBPL2Q9H1P3 480 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 TJP2Q9UDY2 1190 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 ZFR2Q9UPR6 939 aaKnown RBP13.6□□□□□ -0.23
USF1-206ENST00000491629 ZDHHC9Q9Y397 364 aa13.6□□□□□ -0.23
USF1-206ENST00000491629 UNC13CQ8NB66 2214 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 RELNP78509 3460 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 A0A1W2PQU0 124 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 CAPN8A6NHC0 703 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 KCNU1A8MYU2 1149 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 KLK10O43240 276 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 NEBLO76041 1014 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 C6P13671 934 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 TGM2P21980 687 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 FMO5P49326 533 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 ERVPABLB-1P60509 514 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
USF1-206ENST00000491629 ZNF542PQ5EBM4 170 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 KIAA1614Q5VZ46 1190 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 FBXL22Q6P050 247 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 DENND1BQ6P3S1 775 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 BEND5Q7L4P6 421 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 ARHGEF19Q8IW93 802 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 CCDC117Q8IWD4 279 aaPredicted RBP13.59□□□□□ -0.23
USF1-206ENST00000491629 SH2D3CQ8N5H7 860 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 CCDC47Q96A33 483 aaKnown RBP13.59□□□□□ -0.23
USF1-206ENST00000491629 KREMEN1Q96MU8 473 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 FEM1AQ9BSK4 669 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 SLC4A5Q9BY07 1137 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 PREBQ9HCU5 417 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 GPR27Q9NS67 375 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 KLF15Q9UIH9 416 aa13.59□□□□□ -0.23
USF1-206ENST00000491629 LRP4O75096 1905 aa13.58□□□□□ -0.23
USF1-206ENST00000491629 TCAF2A6NFQ2 919 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 F5H5T6 163 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 K7ESM1 405 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 APOEP02649 317 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 GP1BAP07359 652 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 SRCP12931 536 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 GGCXP38435 758 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 NNMTP40261 264 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 UCNP55089 124 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 VAC14Q08AM6 782 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 PNOCQ13519 176 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 FGL2Q14314 439 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 STILQ15468 1287 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 ISXQ2M1V0 245 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 ACCSLQ4AC99 568 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 TPRG1LQ5T0D9 272 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 BROXQ5VW32 411 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 FAM46CQ5VWP2 391 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 IGF2-ASQ6U949 168 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 RRAGAQ7L523 313 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 ABI3BPQ7Z7G0 1075 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 C14orf80Q86SX3 495 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 PPM1KQ8N3J5 372 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 ERCC4Q92889 916 aaPredicted RBP13.58□□□□□ -0.24
USF1-206ENST00000491629 BMFQ96LC9 184 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 SPATA32Q96LK8 384 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 PSMB7Q99436 277 aa13.58□□□□□ -0.24
USF1-206ENST00000491629 CALN1Q9BXU9 219 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms