RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ADAMTS1Q9UHI8 967 aa17.89■□□□□ 0.45
SEC13-218ENST00000490283 VPS51Q9UID3 782 aa17.89■□□□□ 0.45
SEC13-218ENST00000490283 HS3ST2Q9Y278 367 aa17.89■□□□□ 0.45
SEC13-218ENST00000490283 SPTBN2O15020 2390 aa17.89■□□□□ 0.45
SEC13-218ENST00000490283 CEP192Q8TEP8 1941 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 LRRC53A6NM62 1247 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 UPK3BL1B0FP48 263 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 UPK3BL2E5RIL1 263 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 GOLGA6L19H0YKK7 550 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 VAV1P15498 845 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 RFC1P35251 1148 aaPredicted RBP17.88■□□□□ 0.45
SEC13-218ENST00000490283 RECQLP46063 649 aaPredicted RBP17.88■□□□□ 0.45
SEC13-218ENST00000490283 GALCP54803 685 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 ZNF252P-AS1Q0IIN9 211 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 SEMA3BQ13214 749 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 SFMBT2Q5VUG0 894 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 ACAD10Q6JQN1 1059 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 RETSATQ6NUM9 610 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 NCEH1Q6PIU2 408 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 Q6ZVU0 165 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 OR2I1PQ8NGU4 316 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 OR14C36Q8NHC7 312 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 SKA1Q96BD8 255 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 MCEEQ96PE7 176 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 OSBPL2Q9H1P3 480 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 OSGEPQ9NPF4 335 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 SERGEFQ9UGK8 458 aa17.88■□□□□ 0.45
SEC13-218ENST00000490283 A0A0D9SEW6 157 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 A0A1B0GTH6 734 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 CBX4O00257 560 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 MCF2LO15068 1137 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 SLC7A4O43246 635 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 SNAP91O60641 907 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 SRCP12931 536 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 NRG1Q02297 640 aaPredicted RBP17.87■□□□□ 0.45
SEC13-218ENST00000490283 CCDC15Q0P6D6 951 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 HNRNPDQ14103 355 aaKnown RBP17.87■□□□□ 0.45
SEC13-218ENST00000490283 IQCB1Q15051 598 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 EFHC2Q5JST6 749 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 SCYL2Q6P3W7 929 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 WDR59Q6PJI9 974 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.87■□□□□ 0.45
SEC13-218ENST00000490283 IRF2BP2Q7Z5L9 587 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 DRC7Q8IY82 874 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 AADATQ8N5Z0 425 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 BAP1Q92560 729 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 CENPIQ92674 756 aaPredicted RBP17.87■□□□□ 0.45
SEC13-218ENST00000490283 NTAN1Q96AB6 310 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D31Q96DN5 1066 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 PSMB7Q99436 277 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 FUCA2Q9BTY2 467 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 ATP13A1Q9HD20 1204 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 TM9SF3Q9HD45 589 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 ANGPTL2Q9UKU9 493 aa17.87■□□□□ 0.45
SEC13-218ENST00000490283 GIPC1O14908 333 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 RHOQP17081 205 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 GRIA4P48058 902 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 MAPKAPK2P49137 400 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 CSNK1EP49674 416 aaKnown RBP17.86■□□□□ 0.45
SEC13-218ENST00000490283 ZNF143P52747 638 aaPredicted RBP17.86■□□□□ 0.45
SEC13-218ENST00000490283 HDAC4P56524 1084 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 GNA12Q03113 381 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 SLC20A2Q08357 652 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 SLFN11Q7Z7L1 901 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 MCOLN2Q8IZK6 566 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 OR7D4Q8NG98 312 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 PIP4K2CQ8TBX8 421 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 VCPIP1Q96JH7 1222 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 CNPY3Q9BT09 278 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 EDEM3Q9BZQ6 932 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 GAREM1Q9H706 876 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 CBX8Q9HC52 389 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 DYRK4Q9NR20 520 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 HPCAL4Q9UM19 191 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 PI4KAP42356 2102 aa17.86■□□□□ 0.45
SEC13-218ENST00000490283 CNOT1A5YKK6 2376 aaKnown RBP17.86■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3DA0A087WVF3 549 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3IA0A087WXS9 549 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3EA0A087X179 549 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3KA0A087X1G2 549 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 A0A1B0GVT2 93 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 A0A1W2PPC4 97 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3FA6NER0 549 aaPredicted RBP17.85■□□□□ 0.45
SEC13-218ENST00000490283 TMCO5BA8MYB1 307 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3LB9A6J9 549 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 CCP110O43303 1012 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 PRNPP04156 253 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 PLEKP08567 350 aaPredicted RBP17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3HP0C7X1 549 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 RRM1P23921 792 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 CCR5P51681 352 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 ADPRHP54922 357 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 AIF1P55008 147 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 C21orf59P57076 290 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 GEMIN4P57678 1058 aaKnown RBP17.85■□□□□ 0.45
SEC13-218ENST00000490283 RACK1P63244 317 aaKnown RBP17.85■□□□□ 0.45
SEC13-218ENST00000490283 KLHL30Q0D2K2 578 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 RAB6CQ53S08 254 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3GQ6DHY5 549 aa17.85■□□□□ 0.45
SEC13-218ENST00000490283 TBC1D3CQ6IPX1 549 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms