RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 A0A1B0GVL5 298 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 A0A1B0GVM2 712 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 SART1O43290 800 aaKnown RBP8.44□□□□□ -1.06
USP39-216ENST00000490193 ATP9BO43861 1147 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 RTN2O75298 545 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 PIAS2O75928 621 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 IGLV3-25P01717 112 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 MPOP05164 745 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 EPB41P11171 864 aaKnown RBP8.44□□□□□ -1.06
USP39-216ENST00000490193 VAV1P15498 845 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 TACR2P21452 398 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 RGS7P49802 495 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 OXCT1P55809 520 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 TAS2R38P59533 333 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 GABREP78334 506 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 VAC14Q08AM6 782 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 KCNMA1Q12791 1236 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 CNTN1Q12860 1018 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
USP39-216ENST00000490193 HS1BP3Q53T59 392 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 ARHGAP40Q5TG30 622 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 TTC39BQ5VTQ0 682 aaPredicted RBP8.44□□□□□ -1.06
USP39-216ENST00000490193 NEK5Q6P3R8 708 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 LGI2Q8N0V4 545 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 KCNE4Q8WWG9 221 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 OR8D1Q8WZ84 308 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 ERCC4Q92889 916 aaPredicted RBP8.44□□□□□ -1.06
USP39-216ENST00000490193 GRAMD1AQ96CP6 724 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 KLHDC7BQ96G42 594 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 BTN2A3PQ96KV6 586 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 ZSWIM1Q9BR11 485 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 TRIM62Q9BVG3 475 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 THSD1Q9NS62 852 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 UCKL1Q9NWZ5 548 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 NLGN3Q9NZ94 848 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 XPO7Q9UIA9 1087 aaKnown RBP8.44□□□□□ -1.06
USP39-216ENST00000490193 SARDHQ9UL12 918 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 PPM1HQ9ULR3 514 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 CEP83Q9Y592 693 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 U3KQA8 63 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 BOD1L1Q8NFC6 3051 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 PTPN13Q12923 2485 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 TCAF2A6NFQ2 919 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 C1QTNF3-AMACRE9PGA6 284 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 K7ENP7 123 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 M0QYV0 167 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 MCF2LO15068 1137 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 CETN3O15182 167 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 PMM2O15305 246 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 SLC16A3O15427 465 aaKnown RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 KLK10O43240 276 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 USP12O75317 370 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 CSO75390 466 aaKnown RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 APOEP02649 317 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 THEGLP0DJG4 465 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 ALPPL2P10696 532 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 MAT2AP31153 395 aaKnown RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 DUSP3P51452 185 aaPredicted RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 DNM1Q05193 864 aaKnown RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 MEA1Q16626 185 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 FOXD4L6Q3SYB3 417 aaPredicted RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 PIP5KL1Q5T9C9 394 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 RAP1GAP2Q684P5 730 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 CXorf57Q6NSI4 855 aaKnown RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 INO80CQ6PI98 192 aaPredicted RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 TMEM270Q6UE05 265 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 FOXD4L3Q6VB84 417 aaPredicted RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 ABI3BPQ7Z7G0 1075 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 TAC4Q86UU9 113 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 CHSY1Q86X52 802 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 CCAR2Q8N163 923 aaKnown RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 FAM174AQ8TBP5 190 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 ALG14Q96F25 216 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 MED8Q96G25 268 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 NAF1Q96HR8 494 aaKnown RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 APOLD1Q96LR9 279 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 PRMT1Q99873 361 aaKnown RBP8.43□□□□□ -1.06
USP39-216ENST00000490193 DUSP23Q9BVJ7 150 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 GPR27Q9NS67 375 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 EVA1BQ9NVM1 165 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 NAALADL1Q9UQQ1 740 aa8.43□□□□□ -1.06
USP39-216ENST00000490193 A0A1W2PNU3 283 aaPredicted RBP8.42□□□□□ -1.06
USP39-216ENST00000490193 NEMP2A6NFY4 417 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 KCNU1A8MYU2 1149 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 F5H5T6 163 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 RNF225M0QZC1 329 aaPredicted RBP8.42□□□□□ -1.06
USP39-216ENST00000490193 PIK3R2O00459 728 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 SCAMP1O15126 338 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 ARHGAP6O43182 974 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 WISP1O95388 367 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 MOCS2O96007 188 aaPredicted RBP8.42□□□□□ -1.06
USP39-216ENST00000490193 PDGFRAP16234 1089 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 HNRNPA2B1P22626 353 aaKnown RBP8.42□□□□□ -1.06
USP39-216ENST00000490193 GGCXP38435 758 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 MLLT3P42568 568 aaPredicted RBP8.42□□□□□ -1.06
USP39-216ENST00000490193 GPD2P43304 727 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 SYKP43405 635 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 ACADSBP45954 432 aa8.42□□□□□ -1.06
USP39-216ENST00000490193 LY6DQ14210 128 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms