RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 FCHO2Q0JRZ9 810 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 GPS1Q13098 491 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PPP2R5DQ14738 602 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 HERC3Q15034 1050 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 LLGL1Q15334 1064 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 STILQ15468 1287 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 DLG2Q15700 870 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 NRF1Q16656 503 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 HIF1AQ16665 826 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PIGGQ5H8A4 983 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 LGSNQ5TDP6 509 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 C1orf53Q5VUE5 145 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CES4AQ5XG92 561 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 IQSEC1Q6DN90 963 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM122CQ6P4D5 195 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 TRIM72Q6ZMU5 477 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 BNC2Q6ZN30 1099 aaPredicted RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 FRMD7Q6ZUT3 714 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 GPBP1Q86WP2 473 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 LURAP1LQ8IV03 231 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 HERC6Q8IVU3 1022 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CCDC28AQ8IWP9 274 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CLIP4Q8N3C7 705 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PACRGLQ8N7B6 248 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 Q8N9G6 341 aaPredicted RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM47BQ8NA70 645 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 KYQ8NBH2 561 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 OR13F1Q8NGS4 319 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 GRPEL2Q8TAA5 225 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PIWIL2Q8TC59 973 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 BRSK1Q8TDC3 778 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CELF1Q92879 486 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 BTBD6Q96KE9 485 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 FRMD6Q96NE9 622 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CDRT15Q96T59 188 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PCDHB18PQ96TA0 734 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CIB1Q99828 191 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 HERPUD2Q9BSE4 406 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 ISCA1Q9BUE6 129 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 APOL6Q9BWW8 343 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CALN1Q9BXU9 219 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 POLR1BQ9H9Y6 1135 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 AKIP1Q9NQ31 210 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 XPNPEP1Q9NQW7 623 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 DIABLOQ9NR28 239 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CNNM1Q9NRU3 951 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 MRGBPQ9NV56 204 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 SNTG2Q9NY99 539 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 KLQ9UEF7 1012 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 TESMINQ9Y4I5 508 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PCDHB4Q9Y5E5 795 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 SNCAIPQ9Y6H5 919 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PSME4Q14997 1843 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 RIC1Q4ADV7 1423 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 TEX51A0A1B0GUA7 166 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 ISPDA4D126 451 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 E7ESA3 106 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 H7C0C1 242 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PLOD2O00469 737 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 TNPO2O14787 897 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 SHOXO15266 292 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 LIASO43766 372 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 MAN1A2O60476 641 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 RFPL2O75678 378 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 SEC14L2O76054 403 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 SLITRK3O94933 977 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 KRT8P05787 483 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 GSNP06396 782 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 INHBAP08476 426 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 SNRPAP09012 282 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CDH1P12830 882 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 KRT10P13645 584 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 YBX3P16989 372 aaKnown RBP eCLIP4.85□□□□□ -1.636e-11■■□□□ 12.4
SNRNP40-206ENST00000489853 NELFEP18615 380 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 XRCC1P18887 633 aaPredicted RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 FGFR2P21802 821 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 CES1P23141 567 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 IL4RP24394 825 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 MAPK4P31152 587 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 RRM2P31350 389 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 IDUAP35475 653 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 ARL1P40616 181 aaPredicted RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 NAPAP54920 295 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 NME5P56597 212 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 B2MP61769 119 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 COPZ1P61923 177 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 SNX17Q15036 470 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PUM3Q15397 648 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 DUSP7Q16829 419 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 STXBP5Q5T5C0 1151 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 TEDDM1Q5T9Z0 273 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 TTC39BQ5VTQ0 682 aaPredicted RBP4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 IRAK1BP1Q5VVH5 260 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 PDPK2PQ6A1A2 396 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 ACAD10Q6JQN1 1059 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 MAMDC4Q6UXC1 1216 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 LRRC69Q6ZNQ3 347 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 KCTD8Q6ZWB6 473 aa4.85□□□□□ -1.63
SNRNP40-206ENST00000489853 GLRX5Q86SX6 157 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms