RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 IL12RB2Q99665 862 aa21.34■■□□□ 1.01
SND1-214ENST00000489417 CDH7Q9ULB5 785 aa21.34■■□□□ 1.01
SND1-214ENST00000489417 J3KR12 359 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 HOXD9P28356 352 aaPredicted RBP21.33■■□□□ 1.01
SND1-214ENST00000489417 FDFT1P37268 417 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 ETFBP38117 255 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 MTHFRP42898 656 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 TNNT3P45378 269 aaPredicted RBP21.33■■□□□ 1.01
SND1-214ENST00000489417 CDH18Q13634 790 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 FAXCQ5TGI0 409 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 RNF219Q5W0B1 726 aaPredicted RBP21.33■■□□□ 1.01
SND1-214ENST00000489417 RNF43Q68DV7 783 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 HOOK3Q86VS8 718 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 CCDC117Q8IWD4 279 aaPredicted RBP21.33■■□□□ 1.01
SND1-214ENST00000489417 NAT8LQ8N9F0 302 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 USP33Q8TEY7 942 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 PRCCQ92733 491 aaPredicted RBP21.33■■□□□ 1.01
SND1-214ENST00000489417 BHMTQ93088 406 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 TRPV4Q9HBA0 871 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 ETNK1Q9HBU6 452 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 WNT6Q9Y6F9 365 aa21.33■■□□□ 1.01
SND1-214ENST00000489417 A0A0D9SEW6 157 aa21.32■■□□□ 1
SND1-214ENST00000489417 SMAPO00193 183 aa21.32■■□□□ 1
SND1-214ENST00000489417 CHADO15335 359 aa21.32■■□□□ 1
SND1-214ENST00000489417 PRAMEF11O60813 436 aa21.32■■□□□ 1
SND1-214ENST00000489417 PEX11BO96011 259 aa21.32■■□□□ 1
SND1-214ENST00000489417 LTBRP36941 435 aa21.32■■□□□ 1
SND1-214ENST00000489417 VIPR2P41587 438 aa21.32■■□□□ 1
SND1-214ENST00000489417 KCNJ11Q14654 390 aa21.32■■□□□ 1
SND1-214ENST00000489417 PARP6Q2NL67 630 aa21.32■■□□□ 1
SND1-214ENST00000489417 FYB2Q5VWT5 728 aa21.32■■□□□ 1
SND1-214ENST00000489417 ANKRD22Q5VYY1 191 aa21.32■■□□□ 1
SND1-214ENST00000489417 IL31Q6EBC2 164 aa21.32■■□□□ 1
SND1-214ENST00000489417 ITPRIPL1Q6GPH6 555 aa21.32■■□□□ 1
SND1-214ENST00000489417 MFN1Q8IWA4 741 aa21.32■■□□□ 1
SND1-214ENST00000489417 MICALL1Q8N3F8 863 aa21.32■■□□□ 1
SND1-214ENST00000489417 NSMCE1Q8WV22 266 aa21.32■■□□□ 1
SND1-214ENST00000489417 PABPC5Q96DU9 382 aaKnown RBP21.32■■□□□ 1
SND1-214ENST00000489417 TEKT5Q96M29 485 aa21.32■■□□□ 1
SND1-214ENST00000489417 GDAP1L1Q96MZ0 367 aa21.32■■□□□ 1
SND1-214ENST00000489417 AGAP3Q96P47 875 aa21.32■■□□□ 1
SND1-214ENST00000489417 LRRC3BQ96PB8 259 aa21.32■■□□□ 1
SND1-214ENST00000489417 GAS2L1Q99501 681 aaPredicted RBP21.32■■□□□ 1
SND1-214ENST00000489417 SPON2Q9BUD6 331 aa21.32■■□□□ 1
SND1-214ENST00000489417 FOXP3Q9BZS1 431 aa21.32■■□□□ 1
SND1-214ENST00000489417 MUC3BQ9H195 1237 aa21.32■■□□□ 1
SND1-214ENST00000489417 LINC00597Q9H2U6 94 aa21.32■■□□□ 1
SND1-214ENST00000489417 ATP13A1Q9HD20 1204 aa21.32■■□□□ 1
SND1-214ENST00000489417 OBP2AQ9NY56 170 aa21.32■■□□□ 1
SND1-214ENST00000489417 IGSF9Q9P2J2 1179 aa21.32■■□□□ 1
SND1-214ENST00000489417 ZBTB24O43167 697 aaPredicted RBP21.31■■□□□ 1
SND1-214ENST00000489417 KDELR3O43731 214 aa21.31■■□□□ 1
SND1-214ENST00000489417 PSMB4P28070 264 aa21.31■■□□□ 1
SND1-214ENST00000489417 MAGEA6P43360 314 aa21.31■■□□□ 1
SND1-214ENST00000489417 OXCT1P55809 520 aa21.31■■□□□ 1
SND1-214ENST00000489417 SEMA5AQ13591 1074 aa21.31■■□□□ 1
SND1-214ENST00000489417 HNRNPDQ14103 355 aaKnown RBP21.31■■□□□ 1
SND1-214ENST00000489417 FSCBQ5H9T9 825 aa21.31■■□□□ 1
SND1-214ENST00000489417 TMEM25Q86YD3 366 aa21.31■■□□□ 1
SND1-214ENST00000489417 ZCCHC9Q8N567 271 aaKnown RBP21.31■■□□□ 1
SND1-214ENST00000489417 WFDC5Q8TCV5 224 aa21.31■■□□□ 1
SND1-214ENST00000489417 BPIFB1Q8TDL5 484 aa21.31■■□□□ 1
SND1-214ENST00000489417 IRF7Q92985 503 aa21.31■■□□□ 1
SND1-214ENST00000489417 EXOC4Q96A65 974 aa21.31■■□□□ 1
SND1-214ENST00000489417 MSLNLQ96KJ4 702 aa21.31■■□□□ 1
SND1-214ENST00000489417 ACE2Q9BYF1 805 aaPredicted RBP21.31■■□□□ 1
SND1-214ENST00000489417 GBA3Q9H227 469 aa21.31■■□□□ 1
SND1-214ENST00000489417 SPHK2Q9NRA0 654 aa21.31■■□□□ 1
SND1-214ENST00000489417 PLK2Q9NYY3 685 aa21.31■■□□□ 1
SND1-214ENST00000489417 RSPH14Q9UHP6 348 aa21.31■■□□□ 1
SND1-214ENST00000489417 NUP205Q92621 2012 aa21.31■■□□□ 1
SND1-214ENST00000489417 TCRBV7S3A2A0A539 114 aa21.3■■□□□ 1
SND1-214ENST00000489417 NEBLO76041 1014 aa21.3■■□□□ 1
SND1-214ENST00000489417 TMEM63AO94886 807 aa21.3■■□□□ 1
SND1-214ENST00000489417 PENKP01210 267 aaPredicted RBP21.3■■□□□ 1
SND1-214ENST00000489417 CD68P34810 354 aaPredicted RBP21.3■■□□□ 1
SND1-214ENST00000489417 RENBPP51606 427 aa21.3■■□□□ 1
SND1-214ENST00000489417 CNTD1Q8N815 330 aa21.3■■□□□ 1
SND1-214ENST00000489417 LRCH3Q96II8 777 aa21.3■■□□□ 1
SND1-214ENST00000489417 FAM161BQ96MY7 647 aa21.3■■□□□ 1
SND1-214ENST00000489417 ZNF599Q96NL3 588 aa21.3■■□□□ 1
SND1-214ENST00000489417 MYADMQ96S97 322 aa21.3■■□□□ 1
SND1-214ENST00000489417 TSPYL1Q9H0U9 437 aa21.3■■□□□ 1
SND1-214ENST00000489417 PDFQ9HBH1 243 aa21.3■■□□□ 1
SND1-214ENST00000489417 RBM22Q9NW64 420 aaKnown RBP eCLIP21.3■■□□□ 1
SND1-214ENST00000489417 DUS2Q9NX74 493 aaKnown RBP21.3■■□□□ 1
SND1-214ENST00000489417 HPCAL4Q9UM19 191 aa21.3■■□□□ 1
SND1-214ENST00000489417 HEPACAM2A8MVW5 462 aa21.29■■□□□ 1
SND1-214ENST00000489417 E7EVH7 732 aa21.29■■□□□ 1
SND1-214ENST00000489417 F5H423 210 aaPredicted RBP21.29■■□□□ 1
SND1-214ENST00000489417 NFKB1P19838 968 aa21.29■■□□□ 1
SND1-214ENST00000489417 TPSB2P20231 275 aa21.29■■□□□ 1
SND1-214ENST00000489417 FCARP24071 287 aa21.29■■□□□ 1
SND1-214ENST00000489417 MZF1P28698 734 aaPredicted RBP21.29■■□□□ 1
SND1-214ENST00000489417 CSKP41240 450 aa21.29■■□□□ 1
SND1-214ENST00000489417 IFNAR2P48551 515 aa21.29■■□□□ 1
SND1-214ENST00000489417 TPSAB1Q15661 275 aa21.29■■□□□ 1
SND1-214ENST00000489417 TMCO4Q5TGY1 634 aa21.29■■□□□ 1
SND1-214ENST00000489417 MARC1Q5VT66 337 aa21.29■■□□□ 1
SND1-214ENST00000489417 TMC3Q7Z5M5 1100 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms