RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SETMARQ53H47 684 aaPredicted RBP9.49□□□□□ -0.89
SSBP1-212ENST00000489378 MANEAQ5SRI9 462 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 ADGRF1Q5T601 910 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 ZCCHC8Q6NZY4 707 aaKnown RBP9.49□□□□□ -0.89
SSBP1-212ENST00000489378 MMS22LQ6ZRQ5 1243 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 B3GNT8Q7Z7M8 397 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 ZSCAN1Q8NBB4 408 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 PLEKHO2Q8TD55 490 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 NDRG1Q92597 394 aaKnown RBP9.49□□□□□ -0.89
SSBP1-212ENST00000489378 KLK6Q92876 244 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 PTPRN2Q92932 1015 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 DUSP23Q9BVJ7 150 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 CALN1Q9BXU9 219 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 ADNPQ9H2P0 1102 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 FZD3Q9NPG1 666 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 PANK4Q9NVE7 773 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 STIM2Q9P246 746 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 ACSL6Q9UKU0 697 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 ERVW-1Q9UQF0 538 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 CRYBG3Q68DQ2 2970 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 ITIH6Q6UXX5 1313 aa9.49□□□□□ -0.89
SSBP1-212ENST00000489378 SETD2Q9BYW2 2564 aaPredicted RBP9.49□□□□□ -0.89
SSBP1-212ENST00000489378 EME2A4GXA9 379 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 MUSKO15146 869 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 CLIC2O15247 247 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 ASLP04424 464 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 VSIG8P0DPA2 414 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 LIPCP11150 499 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 SLC6A4P31645 630 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 UGT1A5P35504 534 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 ASPAP45381 313 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 CLDN2P57739 230 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 ZNF445P59923 1031 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 PIK3R6Q5UE93 754 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 AGBL4Q5VU57 503 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 SV2BQ7L1I2 683 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 BPHLQ86WA6 291 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 UNC93AQ86WB7 457 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 MFN1Q8IWA4 741 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 FBXO39Q8N4B4 442 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 KDM1BQ8NB78 822 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 ZNF548Q8NEK5 533 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 TPCN2Q8NHX9 752 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 MYEOVQ96EZ4 313 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 KDM4CQ9H3R0 1056 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 SYNDIG1Q9H7V2 258 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 AGPAT3Q9NRZ7 376 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 DNAJC28Q9NX36 388 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 SFMBT1Q9UHJ3 866 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 MED13Q9UHV7 2174 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 SLC7A4O43246 635 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 TGFB1I1O43294 461 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 MSI1O43347 362 aaKnown RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 STX6O43752 255 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 NUMBP49757 651 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 STK19P49842 368 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 POLE2P56282 527 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 TAS2R38P59533 333 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 CNTN1Q12860 1018 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 KCNAB2Q13303 367 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 ELAVL3Q14576 367 aaKnown RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 DEFB133Q30KQ1 61 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 FSCBQ5H9T9 825 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 PITRM1Q5JRX3 1037 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 MPP7Q5T2T1 576 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 SPOPLQ6IQ16 392 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 RAB11FIP2Q7L804 512 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 BHLHA9Q7RTU4 235 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 ZFAND4Q86XD8 727 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 ARHGAP18Q8N392 663 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 FIBINQ8TAL6 211 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 RPL10LQ96L21 214 aaKnown RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 PRICKLE1Q96MT3 831 aaPredicted RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 DUSP16Q9BY84 665 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 EPB41L5Q9HCM4 733 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 ANAPC2Q9UJX6 822 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 SARDHQ9UL12 918 aa9.48□□□□□ -0.89
SSBP1-212ENST00000489378 HBS1LQ9Y450 684 aaKnown RBP9.48□□□□□ -0.89
SSBP1-212ENST00000489378 RNGTTO60942 597 aaKnown RBP9.47□□□□□ -0.89
SSBP1-212ENST00000489378 C4BPAP04003 597 aaKnown RBP9.47□□□□□ -0.89
SSBP1-212ENST00000489378 SRPRAP08240 638 aaKnown RBP9.47□□□□□ -0.89
SSBP1-212ENST00000489378 SLFN14P0C7P3 912 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 RPS24P62847 133 aaKnown RBP9.47□□□□□ -0.89
SSBP1-212ENST00000489378 SPIDRQ14159 915 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 NR0B2Q15466 257 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 FAM133BQ5BKY9 247 aaKnown RBP9.47□□□□□ -0.89
SSBP1-212ENST00000489378 RRAGBQ5VZM2 374 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 OR6B2Q6IFH4 312 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 BORAQ6PGQ7 559 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 GCNT7Q6ZNI0 430 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 DSG4Q86SJ6 1040 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 XXYLT1Q8NBI6 393 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 EDEM1Q92611 657 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 MIB2Q96AX9 1013 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 FOXP3Q9BZS1 431 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 ZNF71Q9NQZ8 489 aaPredicted RBP9.47□□□□□ -0.89
SSBP1-212ENST00000489378 NCKIPSDQ9NZQ3 722 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 SEPT10Q9P0V9 454 aa9.47□□□□□ -0.89
SSBP1-212ENST00000489378 PISDQ9UG56 409 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms