RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 GALCP54803 685 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 BNC1Q01954 994 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 NR1I3Q14994 352 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 PPP1R15BQ5SWA1 713 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 C6orf118Q5T5N4 469 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 DNAJC24Q6P3W2 148 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 Q6ZVU0 165 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 MCOLN2Q8IZK6 566 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 OR7D4Q8NG98 312 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 OMDQ99983 421 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 C2orf49Q9BVC5 232 aaPredicted RBP25.62■■□□□ 1.69
HMGN1-217ENST00000489072 PPARGC1AQ9UBK2 798 aaKnown RBP25.62■■□□□ 1.69
HMGN1-217ENST00000489072 OR12D3Q9UGF7 316 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 CEP295Q9C0D2 2601 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 FAM72CH0Y354 149 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 K7ERQ8 282 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 ADH1BP00325 375 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 SERPINC1P01008 464 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 IGHV4-34P06331 123 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 CSRP1P21291 193 aaKnown RBP25.61■■□□□ 1.69
HMGN1-217ENST00000489072 TNFAIP3P21580 790 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 C5AR1P21730 350 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 GLDCP23378 1020 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 RRM1P23921 792 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 RPL7AP62424 266 aaKnown RBP25.61■■□□□ 1.69
HMGN1-217ENST00000489072 KRT83P78385 493 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 NRG1Q02297 640 aaPredicted RBP25.61■■□□□ 1.69
HMGN1-217ENST00000489072 SEMA3BQ13214 749 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 ARL13BQ3SXY8 428 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 FAM72AQ5TYM5 149 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 FAM72DQ6L9T8 149 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 FAM72BQ86X60 149 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 HDDC3Q8N4P3 179 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 DCAF4L2Q8NA75 395 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 MCEEQ96PE7 176 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 ORAI3Q9BRQ5 295 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 OSBPL2Q9H1P3 480 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 DNAAF2Q9NVR5 837 aaKnown RBP25.61■■□□□ 1.69
HMGN1-217ENST00000489072 SARDHQ9UL12 918 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 FZD4Q9ULV1 537 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 NEU3Q9UQ49 428 aa25.61■■□□□ 1.69
HMGN1-217ENST00000489072 CABIN1Q9Y6J0 2220 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 ILVBLA1L0T0 632 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 FAM47DPA6NHR8 397 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 CCP110O43303 1012 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 SMAD6O43541 496 aaKnown RBP25.6■■□□□ 1.69
HMGN1-217ENST00000489072 OPHN1O60890 802 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 GJB3O75712 270 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 DRD3P35462 400 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 SFSWAPQ12872 951 aaKnown RBP25.6■■□□□ 1.69
HMGN1-217ENST00000489072 ASIC2Q16515 512 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 KIAA0895LQ68EN5 471 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 NCEH1Q6PIU2 408 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 LRSAM1Q6UWE0 723 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 LINGO4Q6UY18 593 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 PIP4P1Q86T03 277 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 DEFB124Q8NES8 71 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 OR8D1Q8WZ84 308 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 HAUS4Q9H6D7 363 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 AIPL1Q9NZN9 384 aa25.6■■□□□ 1.69
HMGN1-217ENST00000489072 C10orf142B7Z368 130 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 PLK4O00444 970 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 GOT1P17174 413 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 ZNF143P52747 638 aaPredicted RBP25.59■■□□□ 1.69
HMGN1-217ENST00000489072 FANCCQ00597 558 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 SFMBT2Q5VUG0 894 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 ZNF783Q6ZMS7 281 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 ZNF571Q7Z3V5 609 aaPredicted RBP25.59■■□□□ 1.69
HMGN1-217ENST00000489072 DNAAF5Q86Y56 855 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 DRC7Q8IY82 874 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 ATP11CQ8NB49 1132 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 NTAN1Q96AB6 310 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 ZDHHC5Q9C0B5 715 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 TM9SF3Q9HD45 589 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 NDFIP2Q9NV92 336 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 PPM1HQ9ULR3 514 aa25.59■■□□□ 1.69
HMGN1-217ENST00000489072 TMEM131Q92545 1883 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 TMCO5BA8MYB1 307 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 UPK3BL1B0FP48 263 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 UPK3BL2E5RIL1 263 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 MCF2LO15068 1137 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 BNIP3LO60238 219 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 ZMPSTE24O75844 475 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 LRIG2O94898 1065 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 PLEKP08567 350 aaPredicted RBP25.58■■□□□ 1.69
HMGN1-217ENST00000489072 CD27P26842 260 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 PRKCIP41743 596 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 CSNK1EP49674 416 aaKnown RBP25.58■■□□□ 1.69
HMGN1-217ENST00000489072 GNA12Q03113 381 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 NLRP14Q86W24 1093 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 OR2T34Q8NGX1 318 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 FAM131CQ96AQ9 280 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 SPON2Q9BUD6 331 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 DOCK9Q9BZ29 2069 aa25.58■■□□□ 1.69
HMGN1-217ENST00000489072 TP53BP1Q12888 1972 aaPredicted RBP25.58■■□□□ 1.69
HMGN1-217ENST00000489072 A0A1B0GVT2 93 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 LRRC72A6NJI9 287 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 ALOX15BO15296 676 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 CEACAM1P13688 526 aa25.57■■□□□ 1.68
HMGN1-217ENST00000489072 CD59P13987 128 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms