RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 DEPDC1Q5TB30 811 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 RWDD4Q6NW29 188 aaKnown RBP7.81□□□□□ -1.16
BEST3-205ENST00000488961 SLC27A1Q6PCB7 646 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 SYDE1Q6ZW31 735 aaPredicted RBP7.81□□□□□ -1.16
BEST3-205ENST00000488961 SNX31Q8N9S9 440 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 DENND1AQ8TEH3 1009 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 SLC35F5Q8WV83 523 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 CSPG4P5Q96PW8 444 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 TTC1Q99614 292 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 GCOM2Q9BZD3 368 aaPredicted RBP7.81□□□□□ -1.16
BEST3-205ENST00000488961 LHX5Q9H2C1 402 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 CCDC68Q9H2F9 335 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 ADAMTS10Q9H324 1103 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 RSAD1Q9HA92 442 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 MAN1C1Q9NR34 630 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 TRNAU1APQ9NX07 287 aaKnown RBP7.81□□□□□ -1.16
BEST3-205ENST00000488961 MTMR10Q9NXD2 777 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.81□□□□□ -1.16
BEST3-205ENST00000488961 DTLQ9NZJ0 730 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 ZNF212Q9UDV6 495 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 FIS1Q9Y3D6 152 aa7.81□□□□□ -1.16
BEST3-205ENST00000488961 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.81□□□□□ -1.16
BEST3-205ENST00000488961 FUOMA2VDF0 154 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 MYL2P10916 166 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 SLC5A2P31639 672 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 LILRA4P59901 499 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 TMPRSS15P98073 1019 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 TSPY1Q01534 308 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 CAV1Q03135 178 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 UBAP2LQ14157 1087 aaKnown RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 KCNJ11Q14654 390 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 MFSD10Q14728 455 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 CHI3L2Q15782 390 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 NADK2Q4G0N4 442 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 GNASQ5JWF2 1037 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 FAM117BQ6P1L5 589 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 ATG14Q6ZNE5 492 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 RPS27LQ71UM5 84 aaKnown RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 METTL25Q8N6Q8 603 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 APPL2Q8NEU8 664 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 OR52K1Q8NGK4 314 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 RNF34Q969K3 372 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 TSSK1BQ9BXA7 367 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 TMEM120AQ9BXJ8 343 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 ULBP1Q9BZM6 244 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 GRIP2Q9C0E4 1043 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 MANSC1Q9H8J5 431 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 LIN28AQ9H9Z2 209 aaKnown RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 NMRK2Q9NPI5 230 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 HCSTQ9UBK5 93 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 ZFP69BQ9UJL9 534 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 SHOC2Q9UQ13 582 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 COQ6Q9Y2Z9 468 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 MTF2Q9Y483 593 aaPredicted RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 ZSWIM8A7E2V4 1837 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 TXNDC9O14530 226 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 COPEO14579 308 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 ITM2AO43736 263 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 HUS1O60921 280 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 FBXO21O94952 628 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 BDNFP23560 247 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 CTGFP29279 349 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 MSX2P35548 267 aaPredicted RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 ENTPD1P49961 510 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 TKTL1P51854 596 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 AP3M2P53677 418 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 ARPP19P56211 112 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 ITGA9Q13797 1035 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 DUSP28Q4G0W2 176 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 EFHC2Q5JST6 749 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 PPP2R2DQ66LE6 453 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 HEATR6Q6AI08 1181 aaKnown RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 NOTUMQ6P988 496 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 PAOXQ6QHF9 649 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 RAPH1Q70E73 1250 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 PID1Q7Z2X4 250 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 PLEKHH3Q7Z736 793 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 C11orf74Q86VG3 221 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 COLGALT1Q8NBJ5 622 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 SMG8Q8ND04 991 aaKnown RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 BBOF1Q8ND07 529 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 SPATA22Q8NHS9 363 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 ZFP28Q8NHY6 868 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 PPP4R1Q8TF05 950 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 EMID1Q96A84 441 aaPredicted RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 PRICKLE1Q96MT3 831 aaPredicted RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 CGREF1Q99674 301 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 VPS11Q9H270 941 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 PRDM12Q9H4Q4 367 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 ACSS3Q9H6R3 686 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 SYBUQ9NX95 663 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 SFMBT1Q9UHJ3 866 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 LGALS13Q9UHV8 139 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 MOSPD1Q9UJG1 213 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 DRG1Q9Y295 367 aaKnown RBP7.8□□□□□ -1.16
BEST3-205ENST00000488961 PPME1Q9Y570 386 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 TEX264Q9Y6I9 313 aa7.8□□□□□ -1.16
BEST3-205ENST00000488961 MYOCOSA0A1B0GUC4 107 aa7.79□□□□□ -1.16
BEST3-205ENST00000488961 SH3PXD2BA1X283 911 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms