RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DPYSL5Q9BPU6 564 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SPXQ9BT56 116 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TRIM5Q9C035 493 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 C1orf21Q9H246 121 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 DNAJC18Q9H819 358 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SYNPO2LQ9H987 977 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 KCNK9Q9NPC2 374 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SNTG1Q9NSN8 517 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 COMMD8Q9NX08 183 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 COQ3Q9NZJ6 369 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 ZNF70Q9UC06 446 aaPredicted RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TUBE1Q9UJT0 475 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 CDC42EP3Q9UKI2 254 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 PADI1Q9ULC6 663 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SLC45A2Q9UMX9 530 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 TRPV2Q9Y5S1 764 aa3.59□□□□□ -1.83
PRPF4-203ENST00000488937 SPAG9O60271 1321 aaKnown RBP3.59□□□□□ -1.83
PRPF4-203ENST00000488937 hCG_1809904A0A1W2PP81 198 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 A0A1W2PPE2 198 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 A0A1W2PR64 198 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 PMS2P1A4D2B8 440 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 OR2A25A4D2G3 310 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 E9PLN8 166 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 MATN2O00339 956 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 DNM1LO00429 736 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 DCLK1O15075 740 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 PSMD10O75832 226 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 STAM2O75886 525 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 ALDH1A2O94788 518 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 HAUS5O94927 633 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 SIX3O95343 332 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 PNPP00491 289 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 GCP02774 474 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 CFIP05156 583 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 URODP06132 367 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 FYNP06241 537 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 CYP2A6P11509 494 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 SFTPCP11686 197 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 ACP5P13686 325 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 TNNT1P13805 278 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 GABRB1P18505 474 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 SAT1P21673 171 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 HTR7P34969 479 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 NRIP1P48552 1158 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 TOB1P50616 345 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 CDH8P55286 799 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 POLR2FP61218 127 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 UFM1P61960 85 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 PRAMEP78395 509 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 HTD2P86397 168 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 HGFACQ04756 655 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 EIF2B5Q13144 721 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 CRHR2Q13324 411 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 MTA1Q13330 715 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 GRM7Q14831 915 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 SMU1Q2TAY7 513 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 ZIK1Q3SY52 487 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 FAM47AQ5JRC9 791 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 GLRA4Q5JXX5 417 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 ATXN7L2Q5T6C5 722 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 KDELC1Q6UW63 502 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 CCDC73Q6ZRK6 1079 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 LINC00696Q6ZRV3 163 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 RBPMS2Q6ZRY4 209 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 USP30Q70CQ3 517 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 OTOAQ7RTW8 1153 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 TICAM1Q8IUC6 712 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 TMEM116Q8NCL8 245 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 ZBTB44Q8NCP5 570 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 NLGN4YQ8NFZ3 816 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 OR6J1Q8NGC5 347 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 SPATA3Q8NHX4 192 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 KIF18AQ8NI77 898 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 SUN3Q8TAQ9 357 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 FBXO30Q8TB52 745 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 NEK9Q8TD19 979 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 POMGNT1Q8WZA1 660 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 ATP6V0A1Q93050 837 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 LPPQ93052 612 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 INTS12Q96CB8 462 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 PGAM5Q96HS1 289 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 C16orf45Q96MC5 204 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 CFAP57Q96MR6 1250 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 VKORC1Q9BQB6 163 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 CLSTN3Q9BQT9 956 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 NTPCRQ9BSD7 190 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 HTATIP2Q9BUP3 242 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 STRA6Q9BX79 667 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 MRPL1Q9BYD6 325 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 SIK2Q9H0K1 926 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 OR10A2Q9H208 303 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 MMADHCQ9H3L0 296 aaPredicted RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 THAP9Q9H5L6 903 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 RIOX1Q9H6W3 641 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 KAT14Q9H8E8 782 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 MBNL1Q9NR56 388 aaKnown RBP3.58□□□□□ -1.84
PRPF4-203ENST00000488937 ZSCAN32Q9NX65 697 aa3.58□□□□□ -1.84
PRPF4-203ENST00000488937 MCM9Q9NXL9 1143 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms