RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 STX18Q9P2W9 335 aaKnown RBP12.94□□□□□ -0.34
CLIC4-202ENST00000488683 A6NHS1 94 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 AURKAO14965 403 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 PPP1R12AO14974 1030 aaPredicted RBP12.93□□□□□ -0.34
CLIC4-202ENST00000488683 HSPA4LO95757 839 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 C2P06681 752 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 ACADSP16219 412 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 BDNFP23560 247 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 CDK18Q07002 472 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 SEMA3BQ13214 749 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 ANKRD20A4Q4UJ75 823 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 STXBP5Q5T5C0 1151 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 SDHAF4Q5VUM1 108 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 FOXB2Q5VYV0 432 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 TOP6BLQ8N6T0 577 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 PPP4R1Q8TF05 950 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 OR12D3Q9UGF7 316 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 SFMBT1Q9UHJ3 866 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 STAP1Q9ULZ2 295 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 G3V2L1 256 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 STX16-NPEPL1H3BU86 382 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 GABRDO14764 452 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 LRIG2O94898 1065 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 MOCS2O96007 188 aaPredicted RBP12.93□□□□□ -0.34
CLIC4-202ENST00000488683 FAM200BP0CF97 657 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 HDCP19113 662 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 GP5P40197 560 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 CHRNA4P43681 627 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 KLC1Q07866 573 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 SLC41A1Q8IVJ1 513 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLIC4-202ENST00000488683 KCTD4Q8WVF5 259 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 USP13Q92995 863 aaPredicted RBP12.93□□□□□ -0.34
CLIC4-202ENST00000488683 NUF2Q9BZD4 464 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 BRD8Q9H0E9 1235 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 DCDC2Q9UHG0 476 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 ADAMTS6Q9UKP5 1117 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 TLL2Q9Y6L7 1015 aa12.93□□□□□ -0.34
CLIC4-202ENST00000488683 SF3B1O75533 1304 aaKnown RBP eCLIP12.93□□□□□ -0.345e-6■■■■■ 83.6
CLIC4-202ENST00000488683 NEMP2A6NFY4 417 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 AIM2O14862 343 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 LUC7L3O95232 432 aaKnown RBP12.92□□□□□ -0.34
CLIC4-202ENST00000488683 SERPINE1P05121 402 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 OR4Q2P0C623 313 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 SP100P23497 879 aaPredicted RBP12.92□□□□□ -0.34
CLIC4-202ENST00000488683 DAOAP59103 153 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 FAM35AQ86V20 835 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 KCNMB4Q86W47 210 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 RNF135Q8IUD6 432 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 LMNTD2Q8IXW0 634 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 CNTD1Q8N815 330 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
CLIC4-202ENST00000488683 RBBP8Q99708 897 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
CLIC4-202ENST00000488683 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 SUDS3Q9H7L9 328 aaPredicted RBP12.92□□□□□ -0.34
CLIC4-202ENST00000488683 MYLKQ15746 1914 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 MAP3K7O43318 606 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 XPOTO43592 962 aaKnown RBP12.92□□□□□ -0.34
CLIC4-202ENST00000488683 CIB2O75838 187 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 AP2A1O95782 977 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 MT-CO1P00395 513 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 ITGB1P05556 798 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 AOC1P19801 751 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 TCN1P20061 433 aaPredicted RBP12.92□□□□□ -0.34
CLIC4-202ENST00000488683 GABRB3P28472 473 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 AXLP30530 894 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 PSEN2P49810 448 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 PCSK7Q16549 785 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 CMPK2Q5EBM0 449 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 MFSD6LQ8IWD5 586 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 FAM156AQ8NDB6 213 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 IPMKQ8NFU5 416 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 SCYL1Q96KG9 808 aa12.92□□□□□ -0.34
CLIC4-202ENST00000488683 CFLARO15519 480 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 MAGEA12P43365 314 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 ACTR3P61158 418 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 CDC42EP1Q00587 391 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 CCNIQ14094 377 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 PDCD2Q16342 344 aaPredicted RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 CFAP157Q5JU67 520 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 KCTD11Q693B1 232 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 BHLHA9Q7RTU4 235 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 TMEM135Q86UB9 458 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 TAC4Q86UU9 113 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 URGCPQ8TCY9 931 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 CPNE1Q99829 537 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 NAT9Q9BTE0 207 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 COLEC11Q9BWP8 271 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 GATA5Q9BWX5 397 aaPredicted RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 WDCPQ9H6R7 721 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 CORO1CQ9ULV4 474 aaPredicted RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 SOX13Q9UN79 622 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 C9IYK1 514 aa12.91□□□□□ -0.34
CLIC4-202ENST00000488683 LIN7AO14910 233 aaPredicted RBP12.91□□□□□ -0.34
CLIC4-202ENST00000488683 PMPCBO75439 489 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms