RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 DDIT4Q9NX09 232 aa19.58■□□□□ 0.73
GGPS1-206ENST00000488594 LETM1O95202 739 aaPredicted RBP19.57■□□□□ 0.72
GGPS1-206ENST00000488594 GNA14O95837 355 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 MT-CO3P00414 261 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 NUMBP49757 651 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 PITX1P78337 314 aaPredicted RBP19.57■□□□□ 0.72
GGPS1-206ENST00000488594 PDCLQ13371 301 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 Q6ZVU0 165 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 ENOSF1Q7L5Y1 443 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 ERICH1Q86X53 443 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 SLC25A45Q8N413 288 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 OR4C6Q8NH72 309 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 ZNF606Q8WXB4 792 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 CCDC114Q96M63 670 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 TIGD1Q96MW7 591 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 ASNSD1Q9NWL6 643 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 VPS28Q9UK41 221 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 FARP1Q9Y4F1 1045 aaPredicted RBP19.57■□□□□ 0.72
GGPS1-206ENST00000488594 PTPRQQ9UMZ3 2332 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 NYNRINQ9P2P1 1898 aaKnown RBP19.57■□□□□ 0.72
GGPS1-206ENST00000488594 BICDL2A1A5D9 508 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 CAPN8A6NHC0 703 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 THAP12O43422 761 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 THEGLP0DJG4 465 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 DGKAP23743 735 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 GNA15P30679 374 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 KCNH2Q12809 1159 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 AUHQ13825 339 aaKnown RBP19.57■□□□□ 0.72
GGPS1-206ENST00000488594 POM121L1PQ3SYA9 428 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 TTI2Q6NXR4 508 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 TRIM59Q8IWR1 403 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 SPACA3Q8IXA5 215 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 SH2D3CQ8N5H7 860 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 SLC2A13Q96QE2 648 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 INTS2Q9H0H0 1204 aaKnown RBP19.57■□□□□ 0.72
GGPS1-206ENST00000488594 HS3ST2Q9Y278 367 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 OR51B4Q9Y5P0 310 aa19.57■□□□□ 0.72
GGPS1-206ENST00000488594 HSF2BPO75031 334 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 CLDN11O75508 207 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 AFPP02771 609 aaKnown RBP19.56■□□□□ 0.72
GGPS1-206ENST00000488594 TAS2R38P59533 333 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 CENPCQ03188 943 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 CCDC173Q0VFZ6 552 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 KCNMA1Q12791 1236 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 TAF5Q15542 800 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 EFHC1Q5JVL4 640 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 PIP5KL1Q5T9C9 394 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 KDM7AQ6ZMT4 941 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 LSMEM2Q8N112 164 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 ZNF248Q8NDW4 579 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 FAM81BQ96LP2 452 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 ZNF578Q96N58 590 aaPredicted RBP19.56■□□□□ 0.72
GGPS1-206ENST00000488594 UBE2TQ9NPD8 197 aaPredicted RBP19.56■□□□□ 0.72
GGPS1-206ENST00000488594 EVA1BQ9NVM1 165 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 TBC1D30Q9Y2I9 924 aa19.56■□□□□ 0.72
GGPS1-206ENST00000488594 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.56■□□□□ 0.72
GGPS1-206ENST00000488594 ARID1BQ8NFD5 2236 aaPredicted RBP19.55■□□□□ 0.72
GGPS1-206ENST00000488594 SYNJ2BP-COX16A0A087WUM0 186 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 A0A1W2PQU0 124 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 SLC31A1O15431 190 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 ALPPL2P10696 532 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 CKMT1AP12532 417 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 CD44P16070 742 aaKnown RBP19.55■□□□□ 0.72
GGPS1-206ENST00000488594 AKT2P31751 481 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 MARSP56192 900 aaKnown RBP19.55■□□□□ 0.72
GGPS1-206ENST00000488594 KRT83P78385 493 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 ZNF605Q86T29 641 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 ELOA2Q8IYF1 753 aaPredicted RBP19.55■□□□□ 0.72
GGPS1-206ENST00000488594 DEFB106AQ8N104 65 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 OR52K2Q8NGK3 314 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 FAM174AQ8TBP5 190 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 IFT43Q96FT9 208 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 LGMNQ99538 433 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 COX16Q9P0S2 106 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 VANGL2Q9ULK5 521 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 CA5BQ9Y2D0 317 aa19.55■□□□□ 0.72
GGPS1-206ENST00000488594 SHROOM3Q8TF72 1996 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 NEMP2A6NFY4 417 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 BNIP3LO60238 219 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 GP1BAP07359 652 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 HNRNPA2B1P22626 353 aaKnown RBP19.54■□□□□ 0.72
GGPS1-206ENST00000488594 UCNP55089 124 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 CDH4P55283 916 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 PCBP4P57723 403 aaKnown RBP19.54■□□□□ 0.72
GGPS1-206ENST00000488594 CXADRP78310 365 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 ZNF284Q2VY69 593 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 CDCP2Q5VXM1 449 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 KLHL10Q6JEL2 608 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 HORMAD1Q86X24 394 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 ZNF843Q8N446 348 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 TMIEQ8NEW7 156 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 NELFBQ8WX92 580 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 DEPDC7Q96QD5 511 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 C2orf49Q9BVC5 232 aaPredicted RBP19.54■□□□□ 0.72
GGPS1-206ENST00000488594 MUC3BQ9H195 1237 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 USP29Q9HBJ7 922 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 DYRK4Q9NR20 520 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 UCKL1Q9NWZ5 548 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 MAN1B1Q9UKM7 699 aa19.54■□□□□ 0.72
GGPS1-206ENST00000488594 HS3ST4Q9Y661 456 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms