RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 DLG2Q15700 870 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 MANEALQ5VSG8 457 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 RWDD4Q6NW29 188 aaKnown RBP18.19■□□□□ 0.5
ITGB1-215ENST00000488494 WDR59Q6PJI9 974 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 LINGO4Q6UY18 593 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 DSG4Q86SJ6 1040 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 MCOLN2Q8IZK6 566 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 ATP11CQ8NB49 1132 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 OR7D4Q8NG98 312 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 OR8D1Q8WZ84 308 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 CENPIQ92674 756 aaPredicted RBP18.19■□□□□ 0.5
ITGB1-215ENST00000488494 NEUROG2Q9H2A3 272 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 PPARGC1AQ9UBK2 798 aaKnown RBP18.19■□□□□ 0.5
ITGB1-215ENST00000488494 OR12D3Q9UGF7 316 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 NEU3Q9UQ49 428 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 CNOT1A5YKK6 2376 aaKnown RBP18.19■□□□□ 0.5
ITGB1-215ENST00000488494 PI4KAP42356 2102 aa18.19■□□□□ 0.5
ITGB1-215ENST00000488494 ILVBLA1L0T0 632 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 SIGLEC16A6NMB1 481 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 TMCO5BA8MYB1 307 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 K7ERQ8 282 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 ATMINO43313 823 aaPredicted RBP18.18■□□□□ 0.5
ITGB1-215ENST00000488494 MT-CO1P00395 513 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 IGHV4-34P06331 123 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 TNFAIP3P21580 790 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 GLDCP23378 1020 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 AFF3P51826 1226 aaKnown RBP18.18■□□□□ 0.5
ITGB1-215ENST00000488494 ZNF143P52747 638 aaPredicted RBP18.18■□□□□ 0.5
ITGB1-215ENST00000488494 ADPRHP54922 357 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 POM121L1PQ3SYA9 428 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 N4BP2L1Q5TBK1 243 aaPredicted RBP18.18■□□□□ 0.5
ITGB1-215ENST00000488494 SFMBT2Q5VUG0 894 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 KIAA0895LQ68EN5 471 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 ACAD10Q6JQN1 1059 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 NCEH1Q6PIU2 408 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 DEFB124Q8NES8 71 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 C1orf216Q8TAB5 229 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 ZDHHC5Q9C0B5 715 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 TTYH3Q9C0H2 523 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 ADAMTS1Q9UHI8 967 aa18.18■□□□□ 0.5
ITGB1-215ENST00000488494 LRRC72A6NJI9 287 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 FAM72CH0Y354 149 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 CBX4O00257 560 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 PLK4O00444 970 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 GOT1P17174 413 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 PTMSP20962 102 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 CSRP1P21291 193 aaKnown RBP18.17■□□□□ 0.5
ITGB1-215ENST00000488494 CD27P26842 260 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 DRD3P35462 400 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 GALCP54803 685 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 RPL7AP62424 266 aaKnown RBP18.17■□□□□ 0.5
ITGB1-215ENST00000488494 NRG1Q02297 640 aaPredicted RBP18.17■□□□□ 0.5
ITGB1-215ENST00000488494 ZNF252P-AS1Q0IIN9 211 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 SEMA3BQ13214 749 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 ZSCAN23Q3MJ62 389 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 PPP1R15BQ5SWA1 713 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 FAM72AQ5TYM5 149 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 FAM72DQ6L9T8 149 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 C22orf39Q6P5X5 142 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 LAYNQ6UX15 382 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 ZNF783Q6ZMS7 281 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 FAM72BQ86X60 149 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 OR2T34Q8NGX1 318 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 NTAN1Q96AB6 310 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 TBC1D31Q96DN5 1066 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 SPON2Q9BUD6 331 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 OSBPL2Q9H1P3 480 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 HAUS4Q9H6D7 363 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 ATP13A1Q9HD20 1204 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 TM9SF3Q9HD45 589 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 DNAAF2Q9NVR5 837 aaKnown RBP18.17■□□□□ 0.5
ITGB1-215ENST00000488494 SARDHQ9UL12 918 aa18.17■□□□□ 0.5
ITGB1-215ENST00000488494 CACNA1EQ15878 2313 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 A0A1B0GVT2 93 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 C1QTNF3-AMACRE9PGA6 284 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 ALOX15BO15296 676 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 SMAD6O43541 496 aaKnown RBP18.16■□□□□ 0.5
ITGB1-215ENST00000488494 LRIG2O94898 1065 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 PLEKP08567 350 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-215ENST00000488494 CSNK1EP49674 416 aaKnown RBP18.16■□□□□ 0.5
ITGB1-215ENST00000488494 FANCCQ00597 558 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 BNC1Q01954 994 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 GNA12Q03113 381 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 SCAPQ12770 1279 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 NR1I3Q14994 352 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 PPP1R2P3Q6NXS1 205 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 DCUN1D2Q6PH85 259 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 ZNF571Q7Z3V5 609 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-215ENST00000488494 DNAAF5Q86Y56 855 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 OR14C36Q8NHC7 312 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 CCDC114Q96M63 670 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 MAGEB5Q9BZ81 275 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 AIPL1Q9NZN9 384 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 DOCK4Q8N1I0 1966 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 CEP295Q9C0D2 2601 aa18.16■□□□□ 0.5
ITGB1-215ENST00000488494 GOLGA6L19H0YKK7 550 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 MCF2LO15068 1137 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 RTN2O75298 545 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 GJB3O75712 270 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 CEACAM1P13688 526 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms