RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 A0A1W2PPC4 97 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 K7ERQ8 282 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 CBFA2T3O75081 653 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 RTN2O75298 545 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 ENDOD1O94919 500 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 F9P00740 461 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 WNT1P04628 370 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 GOT1P17174 413 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 CHRNB2P17787 502 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 GLDCP23378 1020 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 RRM1P23921 792 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 MAT2AP31153 395 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 RDXP35241 583 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 DRD3P35462 400 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 SOX5P35711 763 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 OXCT1P55809 520 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 C21orf59P57076 290 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 FMO1Q01740 532 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 HNRNPDQ14103 355 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 SYCP1Q15431 976 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 C15orf59Q2T9L4 293 aaPredicted RBP11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 LRRC31Q6UY01 552 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 LINGO4Q6UY18 593 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 SLCO6A1Q86UG4 719 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 SH2D3CQ8N5H7 860 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 ATP11CQ8NB49 1132 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 MSANTD4Q8NCY6 345 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 OR7D4Q8NG98 312 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 PIP4K2CQ8TBX8 421 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 NT5C3BQ969T7 300 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 SPAG5Q96R06 1193 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 PSMB7Q99436 277 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 SPON2Q9BUD6 331 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 ADAMTS1Q9UHI8 967 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 TMEM59LQ9UK28 342 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 NOCTQ9UK39 431 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 ZMIZ1Q9ULJ6 1067 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 FZD4Q9ULV1 537 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 TBC1D30Q9Y2I9 924 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 ASXL3Q9C0F0 2248 aa11.6□□□□□ -0.55
NIPAL3-207ENST00000488155 E9PAM4 449 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 SMAD6O43541 496 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 ATP9BO43861 1147 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 LSM8O95777 96 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 ATXN1LP0C7T5 689 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 ZNF883P0CG24 379 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 SRCP12931 536 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 CDK11BP21127 795 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 OR1E1P30953 314 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 CTSKP43235 329 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 RACK1P63244 317 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 CDR2Q01850 454 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 CNTN1Q12860 1018 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 ZNF423Q2M1K9 1284 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 C5orf22Q49AR2 442 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 RBM43Q6ZSC3 357 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 GATAD2AQ86YP4 633 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 ZNF683Q8IZ20 524 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 JOSD2Q8TAC2 188 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 RXFP2Q8WXD0 754 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 KLK6Q92876 244 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 GATA6Q92908 595 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 PGAP3Q96FM1 320 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 SERAC1Q96JX3 654 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 PCDHB18PQ96TA0 734 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 ACE2Q9BYF1 805 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 MAGEB5Q9BZ81 275 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 TNKS2Q9H2K2 1166 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 OSGEPQ9NPF4 335 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 SEPT11Q9NVA2 429 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 ANO10Q9NW15 660 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 VPS51Q9UID3 782 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 SIK3Q9Y2K2 1263 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 NEUROG3Q9Y4Z2 214 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 PAXBP1Q9Y5B6 917 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 RP1P56715 2156 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 APC2O95996 2303 aa11.59□□□□□ -0.55
NIPAL3-207ENST00000488155 DRGXA6NNA5 263 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 C1QTNF3-AMACRE9PGA6 284 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 KPNA3O00505 521 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 MCF2LO15068 1137 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 FLRT2O43155 660 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 TRIM16O95361 564 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 CYP1A1P04798 512 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 CTSLP07711 333 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 CD38P28907 300 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 SCNN1AP37088 669 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 STAT1P42224 750 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 CCT8P50990 548 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 JAM2P57087 298 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 KRT83P78385 493 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 UBXN1Q04323 297 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 MTA1Q13330 715 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 SUZ12Q15022 739 aaKnown RBP11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 STX1AQ16623 288 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 FAM46CQ5VWP2 391 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 RAB44Q7Z6P3 723 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-207ENST00000488155 DSG4Q86SJ6 1040 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms