RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 MUC3BQ9H195 1237 aa11.94□□□□□ -0.5
CLIP2-207ENST00000487447 EPC1Q9H2F5 836 aa11.94□□□□□ -0.5
CLIP2-207ENST00000487447 SEMA4AQ9H3S1 761 aa11.94□□□□□ -0.5
CLIP2-207ENST00000487447 PCDH18Q9HCL0 1135 aa11.94□□□□□ -0.5
CLIP2-207ENST00000487447 PRSS16Q9NQE7 514 aa11.94□□□□□ -0.5
CLIP2-207ENST00000487447 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLIP2-207ENST00000487447 SALL4Q9UJQ4 1053 aa11.94□□□□□ -0.5
CLIP2-207ENST00000487447 TFR2Q9UP52 801 aa11.94□□□□□ -0.5
CLIP2-207ENST00000487447 RAD54BQ9Y620 910 aa11.94□□□□□ -0.5
CLIP2-207ENST00000487447 TCRBV21S2A2A0A5A6 115 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 H3BRJ5 948 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 DCLK1O15075 740 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 AXIN1O15169 862 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ARHGAP6O43182 974 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 BUB1BO60566 1050 aaPredicted RBP11.93□□□□□ -0.5
CLIP2-207ENST00000487447 RAMP2O60895 175 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 EPHX1P07099 455 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 SRCP12931 536 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ERCC2P18074 760 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 NDUFV2P19404 249 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 STK19P49842 368 aaPredicted RBP11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ST8SIA6P61647 398 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 SLC20A2Q08357 652 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 SMTNL2Q2TAL5 461 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 C9orf64Q5T6V5 341 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ANO7Q6IWH7 933 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 LRRC8AQ8IWT6 810 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ARHGAP12Q8IWW6 846 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ACRBPQ8NEB7 543 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 OR2T3Q8NH03 318 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 GAB3Q8WWW8 586 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 PTPRN2Q92932 1015 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 MRGPRX1Q96LB2 322 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 CSPG4P5Q96PW8 444 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ZNF670Q9BS34 389 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 LACRTQ9GZZ8 138 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 MKRN2Q9H000 416 aaKnown RBP11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ZWILCHQ9H900 591 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 ATP13A1Q9HD20 1204 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 SUN2Q9UH99 717 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 DNAI1Q9UI46 699 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 SLCO3A1Q9UIG8 710 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 SLC25A13Q9UJS0 675 aa11.93□□□□□ -0.5
CLIP2-207ENST00000487447 EDDM13A0A1B0GTR0 161 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 ZSCAN5CA6NGD5 496 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 TTC34A8MYJ7 566 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 HRO43593 1189 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 KDELR3O43731 214 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 SNAP91O60641 907 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 HLA-EP13747 358 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 GLDCP23378 1020 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 ACVRL1P37023 503 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 ARL4AP40617 200 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 P2RY2P41231 377 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 PXNP49023 591 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 SERPINH1P50454 418 aaKnown RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 CCZ1BP86790 482 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 CCZ1P86791 482 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 ZBTB16Q05516 673 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 DPYSL3Q14195 570 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 POLD3Q15054 466 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 PDK2Q15119 407 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 TAZQ16635 292 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 MAP7D1Q3KQU3 841 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 PPP6R3Q5H9R7 873 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 RETSATQ6NUM9 610 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 TXLNBQ8N3L3 684 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 LZTR1Q8N653 840 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 NPWQ8N729 165 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 TPCN2Q8NHX9 752 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 HSPH1Q92598 858 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 PDLIM2Q96JY6 352 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 RPL10LQ96L21 214 aaKnown RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 CEP44Q9C0F1 390 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 RSPH9Q9H1X1 276 aaPredicted RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 PDFQ9HBH1 243 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 USP36Q9P275 1121 aaKnown RBP11.92□□□□□ -0.5
CLIP2-207ENST00000487447 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 VPS13AQ96RL7 3174 aa11.92□□□□□ -0.5
CLIP2-207ENST00000487447 C3orf70A6NLC5 250 aaPredicted RBP11.91□□□□□ -0.5
CLIP2-207ENST00000487447 RASA4BC9J798 803 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ALOX15BO15296 676 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 RASA4O43374 803 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 SYNCRIPO60506 623 aaKnown RBP11.91□□□□□ -0.5
CLIP2-207ENST00000487447 SIN3BO75182 1162 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
CLIP2-207ENST00000487447 MT-CO1P00395 513 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 CD48P09326 243 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 COMTP21964 271 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 NNMTP40261 264 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 CDH6P55285 790 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 GEMIN4P57678 1058 aaKnown RBP11.91□□□□□ -0.5
CLIP2-207ENST00000487447 RPS14P62263 151 aaKnown RBP11.91□□□□□ -0.5
CLIP2-207ENST00000487447 SERINC3Q13530 473 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ELAVL3Q14576 367 aaKnown RBP11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ATP13A4Q4VNC1 1196 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 ZNF662Q6ZS27 426 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 C11orf74Q86VG3 221 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 RHOT1Q8IXI2 618 aa11.91□□□□□ -0.5
CLIP2-207ENST00000487447 PLPP6Q8IY26 295 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms