RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ORC3Q9UBD5 711 aaPredicted RBP5.4□□□□□ -1.54
PRPF38A-203ENST00000487160 HDAC6Q9UBN7 1215 aa5.4□□□□□ -1.54
PRPF38A-203ENST00000487160 SLC25A10Q9UBX3 287 aaPredicted RBP5.4□□□□□ -1.54
PRPF38A-203ENST00000487160 ING1Q9UK53 422 aaPredicted RBP5.4□□□□□ -1.54
PRPF38A-203ENST00000487160 PCF11O94913 1555 aaKnown RBP5.4□□□□□ -1.55
PRPF38A-203ENST00000487160 MADDQ8WXG6 1647 aa5.4□□□□□ -1.55
PRPF38A-203ENST00000487160 BCORL1Q5H9F3 1711 aa5.4□□□□□ -1.55
PRPF38A-203ENST00000487160 KDM5BQ9UGL1 1544 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 A0A087X0M5 115 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 A0A1B0GX30 115 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 TCRBV7S3A2A0A539 114 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 TSPAN4O14817 238 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 URODP06132 367 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 ST6GAL1P15907 406 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 TACR3P29371 465 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 MTNR1AP48039 350 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 CCR9P51686 369 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 KLF10Q13118 480 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 MTA1Q13330 715 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 KRT32Q14532 448 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 PRICKLE4Q2TBC4 344 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 HAUS3Q68CZ6 603 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 SUMO4Q6EEV6 95 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 MON1AQ86VX9 555 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 OR52N4Q8NGI2 321 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 KCNG4Q8TDN1 519 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 PIGKQ92643 395 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 CENPIQ92674 756 aaPredicted RBP5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 ASB2Q96Q27 587 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 MPHOSPH8Q99549 860 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 EFHD1Q9BUP0 239 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 TMX4Q9H1E5 349 aaPredicted RBP5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 TTC12Q9H892 705 aaPredicted RBP5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 BEX4Q9NWD9 120 aaPredicted RBP5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 MAFFQ9ULX9 164 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 CAMK2AQ9UQM7 478 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 PTPRMP28827 1452 aa5.39□□□□□ -1.55
PRPF38A-203ENST00000487160 SPATA31D1Q6ZQQ2 1576 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 RIMS1Q86UR5 1692 aaKnown RBP5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 GOLGA6L10A0A0M3HER8 536 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 PER2O15055 1255 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 C1QL1O75973 258 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 DDX58O95786 925 aaKnown RBP5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 GJC1P36383 396 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 ACVRL1P37023 503 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 CLK3P49761 638 aaKnown RBP5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 INHBCP55103 352 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 YPEL5P62699 121 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 ZXDAP98168 799 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 FBXO43Q4G163 708 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 ZNF766Q5HY98 468 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 C10orf76Q5T2E6 689 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 GJB7Q6PEY0 223 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 PCSK4Q6UW60 755 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 RBM44Q6ZP01 1051 aaKnown RBP5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 C4orf50Q6ZRC1 276 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 KLBQ86Z14 1044 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 PAQR4Q8N4S7 273 aaPredicted RBP5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 ZFPM2Q8WW38 1151 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 CNOT9Q92600 299 aaKnown RBP5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 LBHD1Q9BQE6 289 aaPredicted RBP5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 CADM1Q9BY67 442 aaKnown RBP5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 SLC25A18Q9H1K4 315 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 VEZTQ9HBM0 779 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 Q9N2J8 555 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 ZDHHC7Q9NXF8 308 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 PPP1R14DQ9NXH3 145 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 UPB1Q9UBR1 384 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 INSL6Q9Y581 213 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 AOX1Q06278 1338 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 TNIKQ9UKE5 1360 aa5.38□□□□□ -1.55
PRPF38A-203ENST00000487160 GAGE10A6NGK3 116 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 PRSS47A8MTI9 375 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 KCNJ18B7U540 433 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 TEX22C9J3V5 150 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 USO1O60763 962 aaKnown RBP5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 TMEM63AO94886 807 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 PLAUP00749 431 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 HOXA7P31268 230 aaPredicted RBP5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 PTPN9P43378 593 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 DCAF7P61962 342 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 RHAGQ02094 409 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 TFF2Q03403 129 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 DPTQ07507 201 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 PTP4A2Q12974 167 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 SLC18A3Q16572 532 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 FCRLBQ6BAA4 426 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 MZT2BQ6NZ67 158 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 TMEM217Q8N7C4 229 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 ARL14EPQ8N8R7 260 aaPredicted RBP5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 FAM47BQ8NA70 645 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 ANKRD52Q8NB46 1076 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 SETD9Q8NE22 299 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 TNIP2Q8NFZ5 429 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 NFKBIDQ8NI38 313 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 ZNF398Q8TD17 642 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 RAB40AQ8WXH6 277 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 KAT2BQ92831 832 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 KIF1BPQ96EK5 621 aa5.37□□□□□ -1.55
PRPF38A-203ENST00000487160 CHCHD6Q9BRQ6 235 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms