RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CYP2A6P11509 494 aaPredicted RBP3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 LYL1P12980 280 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 TNFAIP3P21580 790 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 TGM2P21980 687 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 HOXD9P28356 352 aaPredicted RBP3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 IDUAP35475 653 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 PGM1P36871 562 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 RPS6KA3P51812 740 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 NR1H2P55055 460 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 MPP1Q00013 466 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 GOLGA8FQ08AF8 430 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 TBL3Q12788 808 aaKnown RBP3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 HYAL1Q12794 435 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 C9orf47Q6ZRZ4 202 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 LRRC8DQ7L1W4 858 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 RSRC2Q7L4I2 434 aaKnown RBP3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 MAATS1Q7Z4T9 603 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 RFX6Q8HWS3 928 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 SCN4BQ8IWT1 228 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 TCP11L2Q8N4U5 519 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 PIGOQ8TEQ8 1089 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 ST8SIA4Q92187 359 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 ATP2A3Q93084 1043 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 SKA1Q96BD8 255 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 RRP36Q96EU6 259 aaKnown RBP3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 GATA5Q9BWX5 397 aaPredicted RBP3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 HDHD5Q9BXW7 423 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 TRIM31Q9BZY9 425 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 VPS33BQ9H267 617 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 TAOK3Q9H2K8 898 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 STN1Q9H668 368 aaKnown RBP3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 KLQ9UEF7 1012 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 CD207Q9UJ71 328 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 SLC25A13Q9UJS0 675 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 ZNF112Q9UJU3 913 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 HSF4Q9ULV5 492 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 ARHGAP26Q9UNA1 814 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 EMSYQ7Z589 1322 aa3.88□□□□□ -1.79
SNRNP27-204ENST00000487029 LMTK3Q96Q04 1460 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 MCIDASD6RGH6 385 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 RRHO14718 337 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 DSCR3O14972 297 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 SYN3O14994 580 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 CCNT1O60563 726 aaKnown RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 RNF8O76064 485 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 MBD4O95243 580 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 CD4P01730 458 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 CYP4B1P13584 511 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 AKR1A1P14550 325 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 PKMP14618 531 aaKnown RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 ARSAP15289 507 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 HOXB9P17482 250 aaPredicted RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 SCP2P22307 547 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 TACR3P29371 465 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 AVPR2P30518 371 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 MVDP53602 400 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 OAZ1P54368 228 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 ADPRHP54922 357 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 GEMIN4P57678 1058 aaKnown RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 BAK1Q16611 211 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 ANXA2RQ3ZCQ2 193 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 GXYLT1Q4G148 440 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 SLC9C2Q5TAH2 1124 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 MTFR2Q6P444 385 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 ZNF474Q6S9Z5 364 aaPredicted RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 DHRS13Q6UX07 377 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 TFAP2DQ7Z6R9 452 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 GALNT7Q86SF2 657 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 TMEM200AQ86VY9 491 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 RHPN2Q8IUC4 686 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 UEVLDQ8IX04 471 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 EXD3Q8N9H8 876 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 LSM14AQ8ND56 463 aaKnown RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 SH3KBP1Q96B97 665 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 RNFT2Q96EX2 444 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 LYZL4Q96KX0 146 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 CTAGE1Q96RT6 745 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 PHF7Q9BWX1 381 aaPredicted RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 AGXT2Q9BYV1 514 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 PAIP1Q9H074 479 aaKnown RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 PREBQ9HCU5 417 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 ERVK-5Q9HDB9 667 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 TLR8Q9NR97 1041 aaKnown RBP3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 MDFICQ9P1T7 246 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 PKP3Q9Y446 797 aa3.87□□□□□ -1.79
SNRNP27-204ENST00000487029 SH2D7A6NKC9 451 aaPredicted RBP3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 HMGB1P1B2RPK0 211 aaPredicted RBP3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 B4E171 279 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 SMAD6O43541 496 aaKnown RBP3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 GUCY1B2O75343 617 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 ATP1A3P13637 1013 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 PRKCHP24723 683 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 GSTM2P28161 218 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 TSPAN7P41732 249 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 GPD2P43304 727 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 ARHGAP8P85298 464 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 LMOD3Q0VAK6 560 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 GALNT2Q10471 571 aa3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 SIM2Q14190 667 aaPredicted RBP3.86□□□□□ -1.79
SNRNP27-204ENST00000487029 TWIST1Q15672 202 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms