RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 F8VZ95 297 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 SNAP91O60641 907 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 CD38P28907 300 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 VASPP50552 380 aaPredicted RBP25.2■■□□□ 1.62
LIME1-206ENST00000487026 CNTN1Q12860 1018 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 TRNP1Q6NT89 227 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 SH2D3CQ8N5H7 860 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 PGAP3Q96FM1 320 aaPredicted RBP25.2■■□□□ 1.62
LIME1-206ENST00000487026 SERAC1Q96JX3 654 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 PSMB7Q99436 277 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 PPM1HQ9ULR3 514 aa25.2■■□□□ 1.62
LIME1-206ENST00000487026 K7ERQ8 282 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 F9P00740 461 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 RHOCP08134 193 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 MAT2AP31153 395 aaKnown RBP25.19■■□□□ 1.62
LIME1-206ENST00000487026 NAA35Q5VZE5 725 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 TFAP2DQ7Z6R9 452 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 DSG4Q86SJ6 1040 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 PHLDB2Q86SQ0 1253 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 GATAD2AQ86YP4 633 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 PIP4K2CQ8TBX8 421 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 SLC20A1Q8WUM9 679 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 CFAP57Q96MR6 1250 aa25.19■■□□□ 1.62
LIME1-206ENST00000487026 A0A0D9SEW6 157 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 A0A1B0GTQ1 180 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 A0A1W2PR77 199 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 DRGXA6NNA5 263 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 MCF2LO15068 1137 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 PCDHGA12O60330 932 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 SRGAP2O75044 1071 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 GFPT2O94808 682 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 LSM8O95777 96 aaKnown RBP25.18■■□□□ 1.62
LIME1-206ENST00000487026 SRCP12931 536 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 SCNN1AP37088 669 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 GRK6P43250 576 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 CCDC157Q569K6 752 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 CT47A1Q5JQC4 288 aaPredicted RBP25.18■■□□□ 1.62
LIME1-206ENST00000487026 FAM46CQ5VWP2 391 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 LRRC31Q6UY01 552 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 CCNI2Q6ZMN8 369 aaPredicted RBP25.18■■□□□ 1.62
LIME1-206ENST00000487026 MARCH9Q86YJ5 346 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 ATP11CQ8NB49 1132 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 EPS8L1Q8TE68 723 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 SKA1Q96BD8 255 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 ELF4Q99607 663 aaPredicted RBP25.18■■□□□ 1.62
LIME1-206ENST00000487026 GANQ9H2C0 597 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 TMEM59LQ9UK28 342 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 DMXL2Q8TDJ6 3036 aa25.18■■□□□ 1.62
LIME1-206ENST00000487026 SMAD6O43541 496 aaKnown RBP25.17■■□□□ 1.62
LIME1-206ENST00000487026 RRM1P23921 792 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 NOMO3P69849 1222 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 KRT83P78385 493 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 ARTNQ5T4W7 220 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 LINGO4Q6UY18 593 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 ENOX1Q8TC92 643 aaKnown RBP25.17■■□□□ 1.62
LIME1-206ENST00000487026 FAM131CQ96AQ9 280 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 C1orf74Q96LT6 269 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 ARHGAP20Q9P2F6 1191 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 VPS51Q9UID3 782 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 PAXBP1Q9Y5B6 917 aa25.17■■□□□ 1.62
LIME1-206ENST00000487026 PLXNB3Q9ULL4 1909 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 E9PAM4 449 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 TAF4O00268 1085 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 LATO43561 262 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 PLRG1O43660 514 aaKnown RBP25.16■■□□□ 1.62
LIME1-206ENST00000487026 DFNA5O60443 496 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 CTSLP07711 333 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 GLDCP23378 1020 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 SCAPQ12770 1279 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 KRT31Q15323 416 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 SHBQ15464 509 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 RAB6CQ53S08 254 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 AGBL4Q5VU57 503 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 FAM131BQ86XD5 332 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 EMC1Q8N766 993 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 MSANTD4Q8NCY6 345 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 C2orf49Q9BVC5 232 aaPredicted RBP25.16■■□□□ 1.62
LIME1-206ENST00000487026 RAB6CQ9H0N0 254 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 FAM207AQ9NSI2 230 aaPredicted RBP25.16■■□□□ 1.62
LIME1-206ENST00000487026 NOCTQ9UK39 431 aaKnown RBP25.16■■□□□ 1.62
LIME1-206ENST00000487026 HS3ST2Q9Y278 367 aa25.16■■□□□ 1.62
LIME1-206ENST00000487026 C1QTNF3-AMACRE9PGA6 284 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 TLR4O00206 839 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 EPHB6O15197 1021 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 ALOX15BO15296 676 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 TNFSF14O43557 240 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 CAPNS1P04632 268 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 CHRNB2P17787 502 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 POLR2FP61218 127 aaKnown RBP25.15■■□□□ 1.62
LIME1-206ENST00000487026 ATP11AP98196 1134 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 CDKAL1Q5VV42 579 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 CLEC17AQ6ZS10 378 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 SETD3Q86TU7 594 aaPredicted RBP25.15■■□□□ 1.62
LIME1-206ENST00000487026 PRPF39Q86UA1 669 aaKnown RBP25.15■■□□□ 1.62
LIME1-206ENST00000487026 OR7D4Q8NG98 312 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 GPT2Q8TD30 523 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 NLRC4Q9NPP4 1024 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 GDF3Q9NR23 364 aa25.15■■□□□ 1.62
LIME1-206ENST00000487026 METTL5Q9NRN9 209 aaKnown RBP25.15■■□□□ 1.62
LIME1-206ENST00000487026 FANCLQ9NW38 375 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms