RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 VAPBO95292 243 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 POLBP06746 335 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 GP5P40197 560 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 SLC6A3Q01959 620 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 POU6F1Q14863 301 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 SURF1Q15526 300 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 TREML2Q5T2D2 321 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 LRRC8EQ6NSJ5 796 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 CLVS1Q8IUQ0 354 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 ZNF786Q8N393 782 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 TSPAN14Q8NG11 270 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 SEPT1Q8WYJ6 367 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 JADE3Q92613 823 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 ACE2Q9BYF1 805 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 ARMC7Q9H6L4 198 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 GBA2Q9HCG7 927 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 TRPC7Q9HCX4 862 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 CHST12Q9NRB3 414 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 STK39Q9UEW8 545 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 EBF1Q9UH73 591 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 CDY2AQ9Y6F7 541 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 CDY1Q9Y6F8 540 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 ANKRD31Q8N7Z5 1873 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 SMIM31A0A1B0GVY4 71 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 E7ENX8 843 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 MAFGO15525 162 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 XPOTO43592 962 aaKnown RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 AKAP5P24588 427 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 NMBRP28336 390 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 SULT1E1P49888 294 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 NDST2P52849 883 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 GRM2Q14416 872 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 ARHGAP17Q68EM7 881 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 ILDR2Q71H61 639 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 UTS2BQ765I0 119 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 OFCC1Q8IZS5 231 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 DEFB106AQ8N104 65 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 FRMD8P1Q9BZ68 369 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 FAM49AQ9H0Q0 323 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 Q9H521 79 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 TMEM134Q9H6X4 195 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 TUBGCP4Q9UGJ1 667 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 BARX2Q9UMQ3 279 aaPredicted RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 A0A0A0MRY4 1105 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 CES1P23141 567 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 EFNA5P52803 228 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 FKBP1AP62942 108 aaKnown RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 MPP1Q00013 466 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 NIPAL4Q0D2K0 466 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 PRPSAP1Q14558 356 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 PDK2Q15119 407 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 KLHL35Q6PF15 583 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 FAM47BQ8NA70 645 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 SPATA13Q96N96 652 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 FBRSL1Q9HCM7 1045 aaKnown RBP12.61□□□□□ -0.39
HSPG2-211ENST00000486901 TLK1Q9UKI8 766 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 CDC14AQ9UNH5 594 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 RNF11Q9Y3C5 154 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 PCDHB12Q9Y5F1 795 aa12.61□□□□□ -0.39
HSPG2-211ENST00000486901 ACKR2O00590 384 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 AKAP10O43572 662 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 TNFAIP8O95379 198 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 THRAP10827 490 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 GRK2P25098 689 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 CSE1LP55060 971 aaKnown RBP12.6□□□□□ -0.39
HSPG2-211ENST00000486901 TARBP2Q15633 366 aaKnown RBP12.6□□□□□ -0.39
HSPG2-211ENST00000486901 ZNF423Q2M1K9 1284 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 SPATA22Q8NHS9 363 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 KBTBD7Q8WVZ9 684 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 GAB3Q8WWW8 586 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 BCO2Q9BYV7 579 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 DNAJC28Q9NX36 388 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 RIMS3Q9UJD0 308 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 LTBP1Q14766 1721 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 RGSL1A5PLK6 1076 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 ZNF286BP0CG31 522 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 TSHRP16473 764 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 ARF4P18085 180 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-211ENST00000486901 ME2P23368 584 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 AGKQ53H12 422 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 XKR5Q6UX68 686 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 LRCH3Q96II8 777 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 RTKNQ9BST9 563 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 PTTG2Q9NZH5 202 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 DNAJB4Q9UDY4 337 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 VANGL2Q9ULK5 521 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 PTGDR2Q9Y5Y4 395 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 COPG1Q9Y678 874 aaKnown RBP12.6□□□□□ -0.39
HSPG2-211ENST00000486901 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
HSPG2-211ENST00000486901 IL1BP01584 269 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 PGAM1P18669 254 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 MPP3Q13368 585 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 ANO4Q32M45 955 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 NOMO2Q5JPE7 1267 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 SYPL2Q5VXT5 272 aa12.6□□□□□ -0.39
HSPG2-211ENST00000486901 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms