RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TMCO2Q7Z6W1 182 aaPredicted RBP11.87□□□□□ -0.51
PRKCB-207ENST00000486868 SETD3Q86TU7 594 aaPredicted RBP11.87□□□□□ -0.51
PRKCB-207ENST00000486868 TMEM135Q86UB9 458 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 KLHL23Q8NBE8 558 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 MZB1Q8WU39 189 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 CDKL2Q92772 493 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 SGSM3Q96HU1 749 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 AGAP3Q96P47 875 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 KLHL5Q96PQ7 755 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 MLPHQ9BV36 600 aaPredicted RBP11.87□□□□□ -0.51
PRKCB-207ENST00000486868 IL21Q9HBE4 155 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 PLAC1Q9HBJ0 212 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 ARNT2Q9HBZ2 717 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 MRM3Q9HC36 420 aaKnown RBP11.87□□□□□ -0.51
PRKCB-207ENST00000486868 INTS9Q9NV88 658 aaKnown RBP11.87□□□□□ -0.51
PRKCB-207ENST00000486868 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 RBM22Q9NW64 420 aaKnown RBP eCLIP11.87□□□□□ -0.51
PRKCB-207ENST00000486868 ZMYM5Q9UJ78 669 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 IKBKGQ9Y6K9 419 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 PCNTO95613 3336 aa11.87□□□□□ -0.51
PRKCB-207ENST00000486868 CXorf51AA0A1B0GTR3 108 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 ILVBLA1L0T0 632 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 GFRA2O00451 464 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 TGM5O43548 720 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 CNTN5O94779 1100 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 USP1O94782 785 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 POLBP06746 335 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 BRAFP15056 766 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 CHN1P15882 459 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 EN2P19622 333 aaPredicted RBP11.86□□□□□ -0.51
PRKCB-207ENST00000486868 CES1P23141 567 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 DDX6P26196 483 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRKCB-207ENST00000486868 CDC25CP30307 473 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 HOXA9P31269 272 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 ADRA1AP35348 466 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 GRIA1P42261 906 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 KCNQ1P51787 676 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 SLC7A9P82251 487 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 GUCY1A3Q02108 690 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 DMTNQ08495 405 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 RFTN1Q14699 578 aaPredicted RBP11.86□□□□□ -0.51
PRKCB-207ENST00000486868 POLD3Q15054 466 aaPredicted RBP11.86□□□□□ -0.51
PRKCB-207ENST00000486868 TMED2Q15363 201 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 KBTBD12Q3ZCT8 623 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 HP1BP3Q5SSJ5 553 aaPredicted RBP11.86□□□□□ -0.51
PRKCB-207ENST00000486868 MARC1Q5VT66 337 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 ALG1LQ6GMV1 187 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 POTEHQ6S545 545 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 TIFABQ6ZNK6 161 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 MARK2Q7KZI7 788 aaKnown RBP11.86□□□□□ -0.51
PRKCB-207ENST00000486868 TMEM150AQ86TG1 271 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 FAM217AQ8IXS0 508 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 LGI2Q8N0V4 545 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 ELMOD1Q8N336 334 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 MRPL43Q8N983 215 aaKnown RBP11.86□□□□□ -0.51
PRKCB-207ENST00000486868 DEPDC1BQ8WUY9 529 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 TADA1Q96BN2 335 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 HMCESQ96FZ2 354 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 SAMD11Q96NU1 681 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 SMC6Q96SB8 1091 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 LRRC3Q9BY71 257 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 MCOLN1Q9GZU1 580 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 CTNNAL1Q9UBT7 734 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 TBC1D30Q9Y2I9 924 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 NR2E3Q9Y5X4 410 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 MAD1L1Q9Y6D9 718 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 KIAA0100Q14667 2235 aaKnown RBP11.86□□□□□ -0.51
PRKCB-207ENST00000486868 GREB1Q4ZG55 1949 aa11.86□□□□□ -0.51
PRKCB-207ENST00000486868 A0A1B0GVM2 712 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 TMEM120BA0PK00 339 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 GMNCA6NCL1 334 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 TCAF2A6NFQ2 919 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 FAM47DPA6NHR8 397 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 H3BNC9 293 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 TLL1O43897 1013 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 PRAMEF11O60813 436 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 KRT37O76014 449 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 KRT38O76015 456 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 NEBLO76041 1014 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 LRG1P02750 347 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 HMBSP08397 361 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 SNRPAP09012 282 aaKnown RBP11.85□□□□□ -0.51
PRKCB-207ENST00000486868 KRT15P19012 456 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 OR1E1P30953 314 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 EPHA5P54756 1037 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 SLC18A2Q05940 514 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 ILF2Q12905 390 aaKnown RBP11.85□□□□□ -0.51
PRKCB-207ENST00000486868 Q6ZNB5 142 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 ARHGAP36Q6ZRI8 547 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 TMC7Q7Z402 723 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 BBS5Q8N3I7 341 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 LEMD2Q8NC56 503 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 NETO2Q8NC67 525 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 KREMEN2Q8NCW0 462 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 DENND1AQ8TEH3 1009 aa11.85□□□□□ -0.51
PRKCB-207ENST00000486868 ATXN2LQ8WWM7 1075 aaKnown RBP11.85□□□□□ -0.51
PRKCB-207ENST00000486868 MRPS31Q92665 395 aaKnown RBP11.85□□□□□ -0.51
PRKCB-207ENST00000486868 IMP4Q96G21 291 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms