RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SUMF1Q8NBK3 374 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 ARHGEF2Q92974 986 aaKnown RBP13.09□□□□□ -0.31
HDAC6-229ENST00000486665 HMCESQ96FZ2 354 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
HDAC6-229ENST00000486665 SLC2A11Q9BYW1 496 aa13.09□□□□□ -0.31
HDAC6-229ENST00000486665 FBRSL1Q9HCM7 1045 aaKnown RBP13.09□□□□□ -0.31
HDAC6-229ENST00000486665 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
HDAC6-229ENST00000486665 KIAA1522Q9P206 1035 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-229ENST00000486665 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
HDAC6-229ENST00000486665 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 KANSL1LA0AUZ9 987 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 PGRMC1O00264 195 aaKnown RBP13.08□□□□□ -0.32
HDAC6-229ENST00000486665 RAMP2O60895 175 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 TGM2P21980 687 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 PAPOLAP51003 745 aaKnown RBP13.08□□□□□ -0.32
HDAC6-229ENST00000486665 GALK1P51570 392 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 NDST2P52849 883 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 OTUD4Q01804 1114 aaKnown RBP13.08□□□□□ -0.32
HDAC6-229ENST00000486665 GALNT2Q10471 571 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 CDH18Q13634 790 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 POLD3Q15054 466 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-229ENST00000486665 MLF2Q15773 248 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-229ENST00000486665 SLC44A4Q53GD3 710 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 CCDC181Q5TID7 509 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 TXNDC11Q6PKC3 985 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 KIAA0907Q7Z7F0 614 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-229ENST00000486665 PHTF2Q8N3S3 785 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 ACTL9Q8TC94 416 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 C1orf54Q8WWF1 131 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 DNASE1L2Q92874 299 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 FEM1AQ9BSK4 669 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 SPON2Q9BUD6 331 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 AP1M1Q9BXS5 423 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 ACE2Q9BYF1 805 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-229ENST00000486665 C10orf88Q9H8K7 445 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 HEBP1Q9NRV9 189 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 ABCB8Q9NUT2 735 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 CDC23Q9UJX2 597 aa13.08□□□□□ -0.32
HDAC6-229ENST00000486665 SPECC1L-ADORA2AF8WAN1 911 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 APOC4-APOC2K7ER74 178 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 DFFAO00273 331 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 APOC2P02655 101 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 GLDCP23378 1020 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 NR2C2P49116 596 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 DGKGP49619 791 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 PLK1P53350 603 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 YBEYP58557 167 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-229ENST00000486665 KDSRQ06136 332 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 UBXN2BQ14CS0 331 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 GEN1Q17RS7 908 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 FAM182AQ5T1J6 154 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 TMEM215Q68D42 235 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 ZNF783Q6ZMS7 281 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 CCDC117Q8IWD4 279 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-229ENST00000486665 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC6-229ENST00000486665 PRELID2Q8N945 189 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 ATG4AQ8WYN0 398 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 P3H4Q92791 437 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 OLFM3Q96PB7 478 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 MUC3BQ9H195 1237 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 MAGEH1Q9H213 219 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 SEMA4AQ9H3S1 761 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 DONSONQ9NYP3 566 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 DEC1Q9P2X7 70 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 GGA2Q9UJY4 613 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 PIAS3Q9Y6X2 628 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 DOCK4Q8N1I0 1966 aa13.07□□□□□ -0.32
HDAC6-229ENST00000486665 SPTBN2O15020 2390 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 ANTXRLA6NF34 631 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 FAM170BA6NMN3 283 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 J3KR12 359 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 KRIT1O00522 736 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 KDELR3O43731 214 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 SNAP91O60641 907 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 ZMPSTE24O75844 475 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 PABPC1P11940 636 aaKnown RBP13.06□□□□□ -0.32
HDAC6-229ENST00000486665 TARSP26639 723 aaKnown RBP13.06□□□□□ -0.32
HDAC6-229ENST00000486665 CTHP32929 405 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 SERPINB6P35237 376 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 PAFAH1B1P43034 410 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 EIF3EP60228 445 aaKnown RBP13.06□□□□□ -0.32
HDAC6-229ENST00000486665 PFKPQ01813 784 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 FZD5Q13467 585 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 SERINC3Q13530 473 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 SNX1Q13596 522 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 NOMO1Q15155 1222 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 PLEKHG6Q3KR16 790 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 PARP15Q460N3 678 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 FUT11Q495W5 492 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 PITRM1Q5JRX3 1037 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 DNTTIP2Q5QJE6 756 aaKnown RBP13.06□□□□□ -0.32
HDAC6-229ENST00000486665 IL31Q6EBC2 164 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 GRAMD4Q6IC98 578 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 TSSK4Q6SA08 328 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 LEKR1Q6ZMV7 388 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 ADIPOR2Q86V24 386 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 ZC3H18Q86VM9 953 aaKnown RBP13.06□□□□□ -0.32
HDAC6-229ENST00000486665 MAIP1Q8WWC4 291 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 PNKPQ96T60 521 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms