RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TRNP1Q6NT89 227 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 NEPROQ6NW34 567 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 GALNT18Q6P9A2 607 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 IGFN1Q86VF2 1251 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 DCLK2Q8N568 766 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 ANKFN1Q8N957 763 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 PCYOX1LQ8NBM8 494 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 TARS2Q9BW92 718 aaKnown RBP10.84□□□□□ -0.67
CCDC171-208ENST00000486641 LHX5Q9H2C1 402 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 ATAD3AQ9NVI7 634 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 GABBR1Q9UBS5 961 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 RAP2CQ9Y3L5 183 aa10.84□□□□□ -0.67
CCDC171-208ENST00000486641 SAC3D1A6NKF1 404 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 KPNA7A9QM74 516 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 DYNC1LI2O43237 492 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 GCATO75600 419 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 CLIC3O95833 236 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 MYCLP12524 364 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 YBX3P16989 372 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TGM2P21980 687 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 MGAT1P26572 445 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 SFNP31947 248 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TTKP33981 857 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 SESN2P58004 480 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 ORC1Q13415 861 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 PDK2Q15119 407 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TRIM16LQ309B1 348 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 MFSD4BQ5TF39 518 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 CES3Q6UWW8 571 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 GK5Q6ZS86 529 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 KCTD8Q6ZWB6 473 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TNIP2Q8NFZ5 429 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 ARNTL2Q8WYA1 636 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 DCPSQ96C86 337 aaKnown RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 DUS3LQ96G46 650 aaKnown RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 ZC3H12CQ9C0D7 883 aaKnown RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 MTMR12Q9C0I1 747 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 NIF3L1Q9GZT8 377 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 MUC3BQ9H195 1237 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 GBA3Q9H227 469 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TPK1Q9H3S4 243 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 B3GNT3Q9Y2A9 372 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TMX2Q9Y320 296 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 ZNF831Q5JPB2 1677 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 PTPRFP10586 1907 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 PRORSD1PA6NEY8 169 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TRIM24O15164 1050 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 PRPSAP2O60256 369 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 PIGNO95427 931 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 LDHAP00338 332 aaKnown RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 EDN1P05305 212 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 CYP2C9P11712 490 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 MATN1P21941 496 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 S100A1P23297 94 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 JAK1P23458 1154 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TNFSF9P41273 254 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 GRIA3P42263 894 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 IREB2P48200 963 aaKnown RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 PSMD8P48556 350 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 ZNF143P52747 638 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 MLLT10P55197 1068 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 NME5P56597 212 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TGFB2P61812 414 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TNK2Q07912 1038 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 DLG2Q15700 870 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 KCNJ8Q15842 424 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 ARL13AQ5H913 290 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 SCYL2Q6P3W7 929 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TTC30AQ86WT1 665 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 ZNF354CQ86Y25 554 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 CBR4Q8N4T8 237 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TERB1Q8NA31 727 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 MCRS1Q96EZ8 462 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TAAR1Q96RJ0 339 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 ADPGKQ9BRR6 497 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 DEFB129Q9H1M3 183 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 VPS33BQ9H267 617 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 DHX35Q9H5Z1 703 aaKnown RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 CAB39LQ9H9S4 337 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 OXSMQ9NWU1 459 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 TXNDC16Q9P2K2 825 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 NXF1Q9UBU9 619 aaKnown RBP10.83□□□□□ -0.68
CCDC171-208ENST00000486641 FBXO40Q9UH90 709 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 CCPG1Q9ULG6 757 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 CDYLQ9Y232 598 aa10.83□□□□□ -0.68
CCDC171-208ENST00000486641 FER1L6Q2WGJ9 1857 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 ZNF839A8K0R7 811 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 PAPSS1O43252 624 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-208ENST00000486641 DGAT1O75907 488 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 BMP2P12643 396 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 TFE3P19532 575 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-208ENST00000486641 RCVRNP35243 200 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 MAGEA12P43365 314 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 RAP1GAPP47736 663 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 NSUN2Q08J23 767 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC171-208ENST00000486641 MERTKQ12866 999 aa10.82□□□□□ -0.68
CCDC171-208ENST00000486641 TRAP1Q12931 704 aaKnown RBP10.82□□□□□ -0.68
CCDC171-208ENST00000486641 SEMA5AQ13591 1074 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms