RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TRIP4Q15650 581 aaPredicted RBP20.77■□□□□ 0.92
HPS3-206ENST00000486530 GALNTL6Q49A17 601 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 RNF19BQ6ZMZ0 732 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 TRIM42Q8IWZ5 723 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 NDUFAF2Q8N183 169 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 GPR152Q8TDT2 470 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 CPNE1Q99829 537 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 TTPALQ9BTX7 342 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 GLOD4Q9HC38 313 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 NDFIP2Q9NV92 336 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 MPP6Q9NZW5 540 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 PPARGC1AQ9UBK2 798 aaKnown RBP20.77■□□□□ 0.92
HPS3-206ENST00000486530 KLF11O14901 512 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 SOAT2O75908 522 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 TROVE2P10155 538 aaKnown RBP eCLIP20.76■□□□□ 0.91
HPS3-206ENST00000486530 NEFHP12036 1026 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 GP5P40197 560 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 RPL10AP62906 217 aaKnown RBP20.76■□□□□ 0.91
HPS3-206ENST00000486530 TAF10Q12962 218 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 ANO4Q32M45 955 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 FAM133BQ5BKY9 247 aaKnown RBP20.76■□□□□ 0.91
HPS3-206ENST00000486530 RSPO2Q6UXX9 243 aaPredicted RBP20.76■□□□□ 0.91
HPS3-206ENST00000486530 OTOP3Q7RTS5 596 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 ZNF683Q8IZ20 524 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 ZNF398Q8TD17 642 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 PTPRN2Q92932 1015 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 ARMC5Q96C12 935 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 BTN2A3PQ96KV6 586 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 FCRL3Q96P31 734 aaPredicted RBP20.76■□□□□ 0.91
HPS3-206ENST00000486530 SLC13A1Q9BZW2 595 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 PRDM5Q9NQX1 630 aaPredicted RBP20.76■□□□□ 0.91
HPS3-206ENST00000486530 SLC17A6Q9P2U8 582 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 SOX13Q9UN79 622 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 SLC27A5Q9Y2P5 690 aa20.76■□□□□ 0.91
HPS3-206ENST00000486530 ZCWPW2A0A1B0GU75 182 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 NT5C1B-RDH14C9J2C7 533 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 VNN2O95498 520 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 IL1BP01584 269 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ERVK-10P10266 1014 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 RHOQP17081 205 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ANKRD20A4Q4UJ75 823 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 MS4A13Q5J8X5 152 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 CERCAMQ5T4B2 595 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ACBD5Q5T8D3 534 aaPredicted RBP20.75■□□□□ 0.91
HPS3-206ENST00000486530 GRTP1Q5TC63 336 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 CES3Q6UWW8 571 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 UMODL1-AS1Q8N2C9 162 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 FITM2Q8N6M3 262 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 C10orf82Q8WW14 230 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 TSSK1BQ9BXA7 367 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ZYG11BQ9C0D3 744 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 CRISPLD1Q9H336 500 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ALG13Q9NP73 1137 aaKnown RBP20.75■□□□□ 0.91
HPS3-206ENST00000486530 GGT7Q9UJ14 662 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ATP11BQ9Y2G3 1177 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 PSAT1Q9Y617 370 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ITGA2BP08514 1039 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ALDH3A1P30838 453 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 GJA8P48165 433 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 PAPOLAP51003 745 aaKnown RBP20.75■□□□□ 0.91
HPS3-206ENST00000486530 NDST2P52849 883 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 GEMP55040 296 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 STXBP5Q5T5C0 1151 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.75■□□□□ 0.91
HPS3-206ENST00000486530 TMEM173Q86WV6 379 aaPredicted RBP20.75■□□□□ 0.91
HPS3-206ENST00000486530 TBL1YQ9BQ87 522 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 APOL2Q9BQE5 337 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 TMEM248Q9NWD8 314 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 UBP1Q9NZI7 540 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 MARCH2Q9P0N8 246 aa20.75■□□□□ 0.91
HPS3-206ENST00000486530 ATP9BO43861 1147 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 DCTN3O75935 186 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 BGNP21810 368 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 PBX3P40426 434 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 SETDB1Q15047 1291 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 PSMD5Q16401 504 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 C10orf120Q5SQS8 335 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 ARMC2Q8NEN0 867 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 FATE1Q969F0 183 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 TMEM39AQ9NV64 488 aa20.74■□□□□ 0.91
HPS3-206ENST00000486530 IGLV3-10A0A075B6K4 115 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 TPP1O14773 563 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 IGLV3-27P01718 113 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 ALDOAP04075 364 aaKnown RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 RING1Q06587 406 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 BNIP1Q12981 228 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 MTA1Q13330 715 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 TTC31Q49AM3 519 aaPredicted RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 KYAT3Q6YP21 454 aaKnown RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 RAB3IL1Q8TBN0 382 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 BCL7CQ8WUZ0 217 aaPredicted RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 ATP2A3Q93084 1043 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 THOC1Q96FV9 657 aaKnown RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 ZNF419Q96HQ0 510 aaPredicted RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 RBM22Q9NW64 420 aaKnown RBP eCLIP20.73■□□□□ 0.91
HPS3-206ENST00000486530 IL1RAPL1Q9NZN1 696 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 IPO11Q9UI26 975 aaKnown RBP20.73■□□□□ 0.91
HPS3-206ENST00000486530 MIA3Q5JRA6 1907 aa20.73■□□□□ 0.91
HPS3-206ENST00000486530 GLRA3O75311 464 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms