RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 L1CAMP32004 1257 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 MAN1A1P33908 653 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 GJA4P35212 333 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 HADHBP55084 474 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 MLLT6P55198 1093 aaPredicted RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 DYNLT1P63172 113 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 FCHO2Q0JRZ9 810 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 CDH18Q13634 790 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 TCEAL1Q15170 157 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 RPS6KA1Q15418 735 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 ITPRIPL2Q3MIP1 535 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 C4orf17Q53FE4 359 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 ALFQ53S48 1182 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 NAIF1Q69YI7 327 aaPredicted RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 TMEM214Q6NUQ4 689 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 AADACL2Q6P093 401 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 TPRG1Q6ZUI0 275 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 CYP4V2Q6ZWL3 525 aaPredicted RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 NT5DC3Q86UY8 548 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 C12orf40Q86WS4 652 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 MFN1Q8IWA4 741 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 ADGRG2Q8IZP9 1017 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 CCDC33Q8N5R6 958 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 UBL4BQ8N7F7 174 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 HJURPQ8NCD3 748 aaPredicted RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 ZNF417Q8TAU3 575 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 LRRN4Q8WUT4 740 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 RAPGEF5Q92565 580 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 ZNF592Q92610 1267 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 NXPE3Q969Y0 559 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 AZIN2Q96A70 460 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 NTAN1Q96AB6 310 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 OTUB2Q96DC9 234 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 ERLEC1Q96DZ1 483 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 CHFRQ96EP1 664 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 P2RY11Q96G91 374 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 CELF6Q96J87 481 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 CALR3Q96L12 384 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 XPO6Q96QU8 1125 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 HAPLN3Q96S86 360 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 ZNF587Q96SQ5 575 aaPredicted RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 PRMT1Q99873 361 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 FAM83CQ9BQN1 747 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 MAK16Q9BXY0 300 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 ZYG11BQ9C0D3 744 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 OSBPL2Q9H1P3 480 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 PCDH18Q9HCL0 1135 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 DNAJC17Q9NVM6 304 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 DNAAF2Q9NVR5 837 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 DDX56Q9NY93 547 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 CLEC4EQ9ULY5 219 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 NDRG2Q9UN36 371 aaKnown RBP5.79□□□□□ -1.48
COPS3-208ENST00000486032 SORCS3Q9UPU3 1222 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 ZKSCAN5Q9Y2L8 839 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.79□□□□□ -1.48
COPS3-208ENST00000486032 PIAS3Q9Y6X2 628 aa5.79□□□□□ -1.48
COPS3-208ENST00000486032 TICRRQ7Z2Z1 1910 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.78□□□□□ -1.48
COPS3-208ENST00000486032 CCDC66A2RUB6 948 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 ANTXRLA6NF34 631 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 SHISA7A6NL88 538 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 SPECC1L-ADORA2AF8WAN1 911 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 KCNK3O14649 394 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 DDX3YO15523 660 aaKnown RBP5.78□□□□□ -1.48
COPS3-208ENST00000486032 PSTPIP1O43586 416 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 TULP3O75386 442 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 ZRANB2O95218 330 aaKnown RBP eCLIP5.78□□□□□ -1.48
COPS3-208ENST00000486032 LUC7L3O95232 432 aaKnown RBP5.78□□□□□ -1.48
COPS3-208ENST00000486032 MAP3K6O95382 1288 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 KRT10P13645 584 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 HOXD9P28356 352 aaPredicted RBP5.78□□□□□ -1.48
COPS3-208ENST00000486032 OR1E1P30953 314 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 CXCR5P32302 372 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 GALK1P51570 392 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 AIF1P55008 147 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 GP2P55259 537 aaKnown RBP5.78□□□□□ -1.48
COPS3-208ENST00000486032 SEC13P55735 322 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 RWDD2BP57060 319 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 PFKPQ01813 784 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 SCAPQ12770 1279 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 ZNF177Q13360 481 aaPredicted RBP5.78□□□□□ -1.48
COPS3-208ENST00000486032 DPYSL3Q14195 570 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 PON2Q15165 354 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 SLC44A4Q53GD3 710 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 FSCBQ5H9T9 825 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 SEL1L2Q5TEA6 688 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 MEI1Q5TIA1 1274 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 CCDC181Q5TID7 509 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 FYB2Q5VWT5 728 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 RNF219Q5W0B1 726 aaPredicted RBP5.78□□□□□ -1.48
COPS3-208ENST00000486032 GRAMD4Q6IC98 578 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 C1orf228Q6PIY5 440 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 TXNDC11Q6PKC3 985 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 MFSD7Q6UXD7 560 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 LEKR1Q6ZMV7 388 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 SPOCD1Q6ZMY3 1216 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 ZNF662Q6ZS27 426 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 RFX8Q6ZV50 586 aa5.78□□□□□ -1.48
COPS3-208ENST00000486032 USP34Q70CQ2 3546 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms